DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-d and cyp-13A10

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_496085.3 Gene:cyp-13A10 / 174522 WormBaseID:WBGene00014254 Length:519 Species:Caenorhabditis elegans


Alignment Length:525 Identity:129/525 - (24%)
Similarity:208/525 - (39%) Gaps:110/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RAFMPG-------GEFQNASITEYTSAMR-----KRYGDIYVMPGMFGRKDWVTTFNTKDIEMVF 107
            |..:||       |.|.....:||...::     |.||.||..     .:..:.|....||::|.
 Worm    28 RRGIPGPLGYPLVGSFPKTLKSEYPQYLQIRDWTKLYGPIYGY-----TEGTIKTLIVSDIDIVR 87

  Fly   108 RNEGIWPRRDGLDSIVYFREHVRPDVYGE----VQG---------LVASQNEAWGKLRSAINPIF 159
            :              ::..::  .:.||.    :||         |.::|...|.:||:..:|.|
 Worm    88 Q--------------IFVEQY--DNFYGRKLNPIQGDPEKDERTNLFSAQGFRWKRLRAISSPTF 136

  Fly   160 MQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPE-DFTDEISRLVFESLGLVAFDRQMGLIR 223
            .. ..||.....:.:...|.:..|:|    :|.|..: |..........:::|.:|..:....:.
 Worm   137 SN-NSLRKINVTVEDSAMELLRHIEE----QTSEGQQIDMLQFYQEFTMDTIGRIAMGQTDSQMF 196

  Fly   224 KN----------RDNSDALTL----FQTSRDIFRLTFKLDIQPSMW--------KIISTPTYRKM 266
            ||          .||...:.|    |.|...:||. |.|.. |.:.        |.:.|....::
 Worm   197 KNPLLKFVRAIFGDNRKHIPLIGGVFPTLAQVFRF-FMLKF-PLLGAANFIHVNKTVVTAVQNRI 259

  Fly   267 KRTLNDSLNVSQKMLKENQDALEKRRQA------------GEKINSNSMLERLMEIDPKVAVIMS 319
            .:..||..|..:  :.|.||.::...:|            |:...::|...|  ::..:..|...
 Worm   260 DQRENDRKNGIE--IGEPQDFIDLFLEARADDVEHFQENNGDFSKTSSYGNR--QLTTQEIVGQC 320

  Fly   320 LDILFAGVDATATLLSAVLLCLSKHPDKQAKLREEL--LSIMPTKDSLLNEENMKDMPYLRAVIK 382
            |..|.||.|.||..||.....|:.||:.|.||:||:  ..|.|:    ::.:::..:.|:..:||
 Worm   321 LVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPS----ISFDHLSKLKYMDCIIK 381

  Fly   383 ETLRYYPNGFGTM---RTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYY-PRPDEFLPERWLRD 443
            ||||.||  .|||   |.|.....|....|..||.|.:.:..|..:...: ....||.||||| |
 Worm   382 ETLRLYP--LGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWL-D 443

  Fly   444 PETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEP 508
            |...:..|..  .::.||.|||.|:|.|:..:|.:..:|.::|.:..|.......|.|   |:..
 Worm   444 PNCDQVFQKG--GYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEVGTKTEIPLK---LVGR 503

  Fly   509 AITFP 513
            |.|.|
 Worm   504 ATTQP 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 121/496 (24%)
cyp-13A10NP_496085.3 p450 32..500 CDD:278495 124/511 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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