DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12d1-d and XB984297

DIOPT Version :9

Sequence 1:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_002933986.3 Gene:XB984297 / 100145331 XenbaseID:XB-GENE-984298 Length:557 Species:Xenopus tropicalis


Alignment Length:522 Identity:127/522 - (24%)
Similarity:232/522 - (44%) Gaps:55/522 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GPVRSSRSASV---LAHEQAKSSITE---EHKTYDEIPRPNKFK-----FMRAFMPGGEFQNASI 68
            |.|::.|.|||   .|...|....||   |.|.::::|.|:..|     |:|.::       ...
 Frog    53 GLVQAGRGASVSQGRAVTGAAVGATEGRKEMKEFEDLPGPSLLKNLYYYFLRGYL-------LHT 110

  Fly    69 TEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDV 133
            .|.....:|.||.::  ....|:...|...:.:.::.:.|.||.:|.|:..|.....|:. |...
 Frog   111 HELQLIYKKMYGPLW--RSEIGKYKMVNIADPEVLQRLVRQEGKYPMRNKEDVWKAHRDK-RKLA 172

  Fly   134 YGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPK-TLEVPED 197
            ||.    ...:...|.::|||:|...::|.....|...::.:..:|::|::::|... :.::..|
 Frog   173 YGP----FTEEGHQWYQIRSALNKKMLKPSEAASYAGGINEVVTDFMDRLQDMRKASPSGDMVND 233

  Fly   198 FTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSM---WKIIS 259
            ..:.:.|..||.:..:.|:.::|.:.|......     |...|.....||..:..:.   |....
 Frog   234 LANALYRFAFEGISNIVFETRIGCLDKQIPPET-----QKFIDSIGYMFKNSVYVTFLPHWTRGI 293

  Fly   260 TPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMS--LDI 322
            .|.:.......::..:..:.::.:....::.|...||::....:...|...:..:..:..  .::
 Frog   294 LPYWDHYIEGWDNIFDFGKHLIDKKMSEIQSRLDKGEEVEGEYLTYLLSSANLTMGEVYGSVCEL 358

  Fly   323 LFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRY 387
            |.||||.|:..|...:..|::.|:.|..:.||:.|..| .|.:...|::.:||.||.|||||||.
 Frog   359 LLAGVDTTSNTLCWAMYHLARDPELQQAVYEEVSSAAP-MDRIPVAEDIPNMPLLRGVIKETLRL 422

  Fly   388 YPNGFGTMR-TCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQ 451
            ||......| ..:.:|.:..||.||.|..:|....:.::...:..|.:|.|:|||||    ..|:
 Frog   423 YPVIPTNARIVSEKEVEIGEYRFPKNTLFVLSHYAIARDEENFEDPLKFKPQRWLRD----GGMK 483

  Fly   452 VSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFN-------------RDASRPFKTM 503
            ..||:.:|||:|.|.|:|||:.:|||...::::||.|.:.::             ...|:|....
 Frog   484 HHPFSSIPFGYGVRACLGKRIAELEMHLALSRVIRMFELRWDPKGEDIKSIARIVLSPSKPVNLQ 548

  Fly   504 FL 505
            ||
 Frog   549 FL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12d1-dNP_995812.1 p450 70..508 CDD:299894 110/456 (24%)
XB984297XP_002933986.3 CYP27A1 118..547 CDD:410739 107/445 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 208 1.000 Inparanoid score I3591
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.