DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and Sp6

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001350159.1 Gene:Sp6 / 83395 MGIID:1932575 Length:376 Species:Mus musculus


Alignment Length:433 Identity:105/433 - (24%)
Similarity:162/433 - (37%) Gaps:144/433 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 IIASPLSSLGSGSTITVSSRNSSAPGIKVRVVQAKNHPGSNARMHLGHVQDFVLPTLTPPSSPES 248
            ::.:...||||..|   .:.::|.|.:.::.:|.          :.||            :|||:
Mouse     1 MLTAVCGSLGSQHT---DAPHASPPRLDLQPLQT----------YQGH------------TSPEA 40

  Fly   249 NLRSHNYAQQLEANDLAALIQQQQQQQQQQQQQQQQQQLNPQ---------PGNSTPATAILRFT 304
            .    :|...|:..:|.:|                  .|.|:         ||.|:..|.     
Mouse    41 G----DYPSPLQPGELQSL------------------PLGPEVDFSQGYELPGASSRVTC----- 78

  Fly   305 SQSNPTMTQLQQQQQQLAVQHLSISPQALGHSNIGSNSPKSSSSSSSNSSNSSSSSHSSSSSISG 369
                                           .::.|:||.:....|.......|..:.|..    
Mouse    79 -------------------------------EDLESDSPLAPGPFSKLLQPDMSHHYESWF---- 108

  Fly   370 SSDQPTHSNI---------PRSTIVRL------TTANGKPGAAGISLARVIQMQNNGNANVAA-- 417
               :|||...         |.::.:.|      .|:.|.|||...:|...:     |:..:.|  
Mouse   109 ---RPTHPGTEDGSWWDLHPGTSWMDLPHTQGALTSPGHPGALQPALGGYV-----GDHQLCAPP 165

  Fly   418 -------VLSAAAN-------SGSSNSNSNSSSSNTSSNSINTATPQQQVLSQRSEKSANGSSKP 468
                   :|.||..       .|:....:.:..|....:|::.|:..:.  |:||...::|.:..
Mouse   166 PHPHPHHLLPAAGGQHLLGPPDGAKALEAAAQESQGLDSSLDAASRPKG--SRRSVPRSSGQTVC 228

  Fly   469 HHPRQHHSDH-----SPDA--KRRIHKCQFLGCKKVYTKSSHLKAHQRTHTGEKPYKCSWEGCEW 526
            ..|....::.     .||.  |:.:|.|...||.|.|.|:||||||.|.|:|::|:.|:|..|..
Mouse   229 RCPNCLEAERLGAPCGPDGGKKKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCGK 293

  Fly   527 RFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            ||.|||||.||.:.|||.|.|.|..|.|.|.||||||.|||.|
Mouse   294 RFTRSDELQRHLQTHTGTKKFPCAVCSRVFMRSDHLAKHMKTH 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 46/110 (42%)
C2H2 Zn finger 489..511 CDD:275368 13/21 (62%)
zf-H2C2_2 503..>519 CDD:290200 9/15 (60%)
C2H2 Zn finger 519..541 CDD:275368 12/21 (57%)
zf-H2C2_2 533..558 CDD:290200 13/24 (54%)
C2H2 Zn finger 549..569 CDD:275368 13/19 (68%)
Sp6NP_001350159.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 19/115 (17%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:Q3SY56 118..126 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..224 10/61 (16%)
C2H2 Zn finger 259..278 CDD:275368 12/18 (67%)
COG5048 <261..>336 CDD:227381 44/74 (59%)
C2H2 Zn finger 286..308 CDD:275368 12/21 (57%)
C2H2 Zn finger 316..336 CDD:275368 13/19 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 334..376 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841555
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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