DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment luna and klf5l

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001035016.2 Gene:klf5l / 562670 ZFINID:ZDB-GENE-060312-34 Length:401 Species:Danio rerio


Alignment Length:313 Identity:120/313 - (38%)
Similarity:148/313 - (47%) Gaps:74/313 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 LNPQPGNSTPATAILRFTSQSNPTMTQLQQQQQQLAVQHLSISPQ--ALGHSNIGSNSPKSSSSS 349
            :..:||...|...      |:.|..|.:....|  .|..|.|.|:  .....:||...| |:...
Zfish   131 IKTEPGLDEPCGI------QTLPEFTSVFSVPQ--TVNSLFIKPEIPVTDELHIGPQQP-SAYQM 186

  Fly   350 SSNSSNSSSSSHSSSSSISGSSDQPTHSNIPRSTIVRLTTANGKPGAAGISLARVIQMQNNGNAN 414
            ..:||:.::.:.|.|.|::|.                     |.||...:            |.|
Zfish   187 PVSSSDLTTMTFSHSQSMNGI---------------------GAPGRTML------------NLN 218

  Fly   415 VAAVLSAAA----------NSGSSNS------NSNSSSSNTSSNSINTATPQQQVLSQRSEKSAN 463
            ..|:.:.:|          ||...:|      ||...|....:..|.:..|.....::...|.  
Zfish   219 TVALTAQSAEFVMPESFTYNSPQPHSLPPSPPNSQPGSPENQAELITSVAPPPPYQARLGMKV-- 281

  Fly   464 GSSKPHH------------PRQHHSDHSPDAKRRIHKCQFLGCKKVYTKSSHLKAHQRTHTGEKP 516
            |...||.            ||.:..::....|||||.|.|.||.|||||||||||||||||||||
Zfish   282 GQMTPHSMIMAHGQGILTGPRYNRRNNPELEKRRIHHCDFQGCNKVYTKSSHLKAHQRTHTGEKP 346

  Fly   517 YKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            |:||||||:||||||||||||||||||||||||..|.||||||||||||||||
Zfish   347 YRCSWEGCDWRFARSDELTRHYRKHTGAKPFKCIACSRCFSRSDHLALHMKRH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 72/115 (63%)
C2H2 Zn finger 489..511 CDD:275368 18/21 (86%)
zf-H2C2_2 503..>519 CDD:290200 15/15 (100%)
C2H2 Zn finger 519..541 CDD:275368 20/21 (95%)
zf-H2C2_2 533..558 CDD:290200 21/24 (88%)
C2H2 Zn finger 549..569 CDD:275368 16/19 (84%)
klf5lNP_001035016.2 COG5048 <226..>401 CDD:227381 93/176 (53%)
zf-C2H2 317..341 CDD:278523 19/23 (83%)
C2H2 Zn finger 324..341 CDD:275368 15/16 (94%)
zf-H2C2_2 333..>349 CDD:290200 15/15 (100%)
zf-C2H2 347..371 CDD:278523 21/23 (91%)
C2H2 Zn finger 349..371 CDD:275368 20/21 (95%)
zf-H2C2_2 363..388 CDD:290200 21/24 (88%)
C2H2 Zn finger 379..399 CDD:275368 16/19 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.970

Return to query results.
Submit another query.