DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and klf5b

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_688525.5 Gene:klf5b / 560043 ZFINID:ZDB-GENE-080424-4 Length:344 Species:Danio rerio


Alignment Length:433 Identity:138/433 - (31%)
Similarity:185/433 - (42%) Gaps:108/433 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 GNMTPT--SISNSSSISSSNSHSNSNGNTTG-SSNIIASPLSSLGSGSTITVSSRNSSAPGIKVR 213
            |.:.|.  ::|:.......|:.:...|.... :.|:....::.|.:|...||   .|..|.||..
Zfish     3 GYLPPQFHALSDHKKYCQDNTFTMDQGTPYSINMNVFLPDVTYLRTGMCRTV---RSVGPQIKTE 64

  Fly   214 VVQAK-NHPGSNARMHLGHVQDFVLPTL---------TPPSSPESNLRSHNYAQQLEANDLAALI 268
            .:.:. |:...:..         |.||:         ||.....||:...:....:|..|:... 
Zfish    65 PIHSSFNYSSCHGT---------VAPTMTHQEYTNLYTPAPETGSNVYIKHETPSIEFQDVPLF- 119

  Fly   269 QQQQQQQQQQQQQQQQQQLNPQ-PGNSTPATAILRFTSQSNPTMTQLQQQQQQLAVQHLSISPQA 332
                        |.....|.|. ||..:       .|...|.|...:                  
Zfish   120 ------------QLLNSDLEPNVPGGHS-------CTDSHNATCPPM------------------ 147

  Fly   333 LGHSNIGSNSPKSSSSSSSNSSNSSSSSHSSSSSISGSSDQPTHSNIPRSTIVRLTTANGKPGAA 397
               |...|..|.||..:..:..|.:|:.:|..:.. |...|...:.:|.|      ..|.:||:.
Zfish   148 ---STYNSIHPASSHGTERSICNMASNGYSLPAQF-GQHPQKRAAYLPPS------PPNSEPGSP 202

  Fly   398 GISLARVIQMQNNGNANVAAVLSAAANSGSSNSNSNSSSSNTSSNSINTATPQQQVLSQRSEKSA 462
            .   .|...:||         ||...:..:|.::..:..:...:.|:.|    |||         
Zfish   203 D---RRKELIQN---------LSPPPSYAASMASKMACLTPGPALSVQT----QQV--------- 242

  Fly   463 NGSSKPHHPRQHHSDHSPDA-KRRIHKCQFLGCKKVYTKSSHLKAHQRTHTGEKPYKCSWEGCEW 526
                    |.|::...:||. |||||.|...|||||||||||||||.||||||||||||||||:|
Zfish   243 --------PAQYNRRSNPDLDKRRIHHCDVPGCKKVYTKSSHLKAHLRTHTGEKPYKCSWEGCDW 299

  Fly   527 RFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            |||||||||||:|||||||||:|..|.||||||||||||||||
Zfish   300 RFARSDELTRHFRKHTGAKPFQCSVCSRCFSRSDHLALHMKRH 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 68/104 (65%)
C2H2 Zn finger 489..511 CDD:275368 17/21 (81%)
zf-H2C2_2 503..>519 CDD:290200 14/15 (93%)
C2H2 Zn finger 519..541 CDD:275368 19/21 (90%)
zf-H2C2_2 533..558 CDD:290200 19/24 (79%)
C2H2 Zn finger 549..569 CDD:275368 16/19 (84%)
klf5bXP_688525.5 COG5048 236..>323 CDD:227381 67/107 (63%)
C2H2 Zn finger 265..284 CDD:275368 16/18 (89%)
C2H2 Zn finger 292..314 CDD:275368 19/21 (90%)
zf-H2C2_2 306..331 CDD:290200 19/24 (79%)
C2H2 Zn finger 322..342 CDD:275368 16/19 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585884
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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