DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and dar1

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001097493.1 Gene:dar1 / 38436 FlyBaseID:FBgn0263239 Length:751 Species:Drosophila melanogaster


Alignment Length:593 Identity:186/593 - (31%)
Similarity:232/593 - (39%) Gaps:255/593 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 SAGNMTPTSISNSSSISSSNSHSNSNGNTTGSSNIIASPLSSLGSGSTITVSSRNSSAPGIKVRV 214
            |..|:.|   .|:..:|||.| ||:||::..|||               |..|..|..|.:|:..
  Fly   238 SIQNIDP---ENALMLSSSGS-SNNNGSSNSSSN---------------TGESATSQLPQVKMEA 283

  Fly   215 VQAKNHPGSNARMHLGHVQDFVLPTLTP---PSSPESNLRSHNYAQQLEANDLAALIQQQQQQQQ 276
            :..            ..::.|..|.|:|   .:..:...:.|.:.||          ||||||||
  Fly   284 IDE------------SLLETFSTPLLSPLEIKTEKQQRQQQHQHQQQ----------QQQQQQQQ 326

  Fly   277 QQQQQQQQQQLNPQ--------------------PGNSTPATAILRFTSQSNPTMTQLQQQQQQL 321
            ||.|||.|||...|                    || ..||..::..         |||||.|| 
  Fly   327 QQHQQQHQQQYQQQHYQQHYQQQHLYQHHPSLALPG-LPPAVDVVEL---------QLQQQHQQ- 380

  Fly   322 AVQHLSISPQALGHSNIGSNSPK---------------------------------SSSSSSSNS 353
             .|||.       |:|..|:|||                                 |||:|...|
  Fly   381 -QQHLQ-------HNNSSSSSPKLATPGDNSGNTSSYQQQYASQLVSGSGGGYLNGSSSNSYGYS 437

  Fly   354 SNSSSSSH-----------------------------------------------------SSSS 365
            .:||.|.|                                                     :|||
  Fly   438 WHSSQSFHTKYQIHPPSAAASATASATATPTAQLGAQQQQQQQQQQQLQQLCPPAAPSTPSTSSS 502

  Fly   366 SISGS--SDQPTHSNIPRSTIVRLTTANGKPGAAGISLARVIQMQNNGNANVAAVLSAAAN---- 424
            |||.|  |....|..:|     .||..:..||:.|.|:             |||..:|||.    
  Fly   503 SISSSSASSASRHMFVP-----PLTPPSSDPGSPGSSM-------------VAAAAAAAAQRRTT 549

  Fly   425 ---------------------------SGSSNSNSNSSSSNTSSNSI--NTATPQQQVLSQR--- 457
                                       :||:||.:.:.::.|.:::|  ....||||.:.|:   
  Fly   550 PPPPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQQPP 614

  Fly   458 -SEKSANGSSKPHHPRQHHSDHSPDA------------------------KRRIHKCQFLGCKKV 497
             :.:|:.|..     |..||.|.|..                        |||||.|.|:||.||
  Fly   615 PTPRSSGGGR-----RGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKV 674

  Fly   498 YTKSSHLKAHQRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHL 562
            ||||||||||||.|||||||.|.|..||||||||||||||||||||||||||..|:|.|:|||||
  Fly   675 YTKSSHLKAHQRIHTGEKPYTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHL 739

  Fly   563 ALHMKRHM 570
            |||||||:
  Fly   740 ALHMKRHL 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 69/131 (53%)
C2H2 Zn finger 489..511 CDD:275368 18/21 (86%)
zf-H2C2_2 503..>519 CDD:290200 14/15 (93%)
C2H2 Zn finger 519..541 CDD:275368 18/21 (86%)
zf-H2C2_2 533..558 CDD:290200 20/24 (83%)
C2H2 Zn finger 549..569 CDD:275368 14/19 (74%)
dar1NP_001097493.1 COG5048 641..>724 CDD:227381 54/82 (66%)
C2H2 Zn finger 671..688 CDD:275368 15/16 (94%)
zf-H2C2_2 680..707 CDD:290200 21/26 (81%)
C2H2 Zn finger 696..718 CDD:275368 18/21 (86%)
zf-H2C2_2 710..735 CDD:290200 20/24 (83%)
C2H2 Zn finger 726..746 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455418
Domainoid 1 1.000 40 1.000 Domainoid score I3723
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I1951
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D416605at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14633
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
77.000

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