DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment luna and sp5a

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_851304.2 Gene:sp5a / 353154 ZFINID:ZDB-GENE-030430-2 Length:368 Species:Danio rerio


Alignment Length:441 Identity:105/441 - (23%)
Similarity:144/441 - (32%) Gaps:187/441 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 SAISPNPSIGSAGNMTPTSISNSSSISSSNSHSNSNGNTTGSSNIIA---SPLSSLGSGSTITVS 201
            |.:|.|||.|         :|:.|.:.||.:..:....|..:.....   ||:..|    ..::.
Zfish    81 STLSSNPSFG---------LSSKSHLQSSYASHHELPLTPPADPTYPYDFSPVKML----PCSMQ 132

  Fly   202 SRNSSAPGIKVRVVQAKNHPGSNARMHLGHVQDFVLPTLTPPSSPESNLRSHNYAQQLEANDLAA 266
            |..|:.|...|..|                  .:..|...||:.| |.:..|           :.
Zfish   133 SLQSTCPPTYVPAV------------------TYAAPAPIPPAMP-SFVPGH-----------SG 167

  Fly   267 LIQQQQQQQQQQQQQQQQQQLNPQPGNSTPATAILRFTSQSNPTMTQLQQQQQQLAVQHLSISPQ 331
            |:            .|||:||:|.||...|..::    .|.||             |.| |:.|.
Zfish   168 LV------------HQQQRQLSPNPGEDIPWWSL----QQGNP-------------VAH-SVHPH 202

  Fly   332 --------ALGHSNIGSNSPKSSSSSSSNSSNSSSSSHSSSSSISGSSDQPTHSNIPRSTIVRLT 388
                    .|||::......:.::.                          .|:..|.:|..|..
Zfish   203 RFPIQRGLVLGHTDFAQYQTQIAAL--------------------------LHTKSPLATARRCR 241

  Fly   389 TANGKPGAAGISLARVIQMQNNGNANVAAVLSAAANSGSSNSNSNSSSSNTSSNSINTATPQQQV 453
            ...                                     ..|..||||                
Zfish   242 RCR-------------------------------------CPNCQSSSS---------------- 253

  Fly   454 LSQRSEKSANGSSKPHHPRQHHSDHSPDAKRRIHKCQFLGCKKVYTKSSHLKAHQRTHTGEKPYK 518
                       |.:|             .|::.|.|...||.|||.|:||||||.|.|:||:|:.
Zfish   254 -----------SDEP-------------GKKKQHICHIPGCGKVYGKTSHLKAHLRWHSGERPFV 294

  Fly   519 CSWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            |:|..|...|.|||||.||.|.|||.|.|.|.:|.:.|.||||||.|:|.|
Zfish   295 CNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPDCCKRFMRSDHLAKHVKTH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 42/103 (41%)
C2H2 Zn finger 489..511 CDD:275368 14/21 (67%)
zf-H2C2_2 503..>519 CDD:290200 10/15 (67%)
C2H2 Zn finger 519..541 CDD:275368 12/21 (57%)
zf-H2C2_2 533..558 CDD:290200 13/24 (54%)
C2H2 Zn finger 549..569 CDD:275368 11/19 (58%)
sp5aNP_851304.2 C2H2 Zn finger 268..287 CDD:275368 13/18 (72%)
zf-H2C2_2 279..306 CDD:290200 14/26 (54%)
C2H2 Zn finger 295..317 CDD:275368 12/21 (57%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
C2H2 Zn finger 325..345 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585901
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.