DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and Sp8

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus


Alignment Length:517 Identity:137/517 - (26%)
Similarity:195/517 - (37%) Gaps:160/517 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LLAAPPSAI-SPNPSIGSAGNMTPTSISNSSSISSSNSH--SNSNGNTTGSSNIIASPLSSLG-S 194
            :|||..:.| ||:||        |:|:|:|||......|  ..|:.:::||.|::.|.|||.| |
Mouse    19 MLAATCNKIGSPSPS--------PSSLSDSSSSFGKGFHPWKRSSSSSSGSCNVVGSSLSSFGVS 75

  Fly   195 GSTITVSSRNSSAPGIKVRVVQAKNHPGSNARMHLGHVQDFVLPTLTPPSSPESNLRSHNYAQQL 259
            |::....|.:::|.........|.                .|..:.:...||.|:      |..|
Mouse    76 GASRNGGSSSAAAAAAAAAAAAAA----------------LVSDSFSCGGSPGSS------AFSL 118

  Fly   260 EANDLAALIQQQQQQQQQQQQQQQQQQLNPQPGNSTPATAILRFTSQSNPTMTQLQQQQQQLAVQ 324
            .::..||                              |.|.....:.|:|........|      
Mouse   119 TSSSAAA------------------------------AAAAAAAAASSSPFANDYSVFQ------ 147

  Fly   325 HLSISPQALGHSNIGSNSPKSSSSSSSNSSNSS----SSSHSSSSSISG------------SSDQ 373
                :|...|.|..|.......|.:.|..|:..    |..|:|...:.|            |..:
Mouse   148 ----APGVSGGSGGGGGGGGGGSGAHSQDSSHQPVFISKVHTSVDGLQGIYPRVGMAHPYESWFK 208

  Fly   374 PTHSNIPRSTIVRLTTANGKPGAAGISL-----ARVIQMQN-NGNANVAAVLSAAA--------- 423
            |:|..:..:..|         |:||.|.     |..|.:|| ||.|.:...|..||         
Mouse   209 PSHPGLGAAADV---------GSAGASSWWDVGAGWIDVQNPNGAAALPGSLHPAAGGLQTSLHS 264

  Fly   424 -----NSGSSNSNSNSSSSNTSSNSINTA-----------TPQQQVLSQRSEKSANGSS------ 466
                 ||..|..:.::.||..||:.::.|           .|.....|..|..:..|||      
Mouse   265 PLGGYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLAGAGSSMLSAGP 329

  Fly   467 ------KPHHPRQHHSDHS----PDA--------------KRRIHKCQFLGCKKVYTKSSHLKAH 507
                  .|....:.:|..:    |:.              ::.:|.|...||.|||.|:||||||
Mouse   330 AAQLGGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAH 394

  Fly   508 QRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            .|.||||:|:.|:|..|..||.|||||.||.|.|||.|.|.|..|::.|.|||||:.|:|.|
Mouse   395 LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 49/133 (37%)
C2H2 Zn finger 489..511 CDD:275368 14/21 (67%)
zf-H2C2_2 503..>519 CDD:290200 11/15 (73%)
C2H2 Zn finger 519..541 CDD:275368 13/21 (62%)
zf-H2C2_2 533..558 CDD:290200 13/24 (54%)
C2H2 Zn finger 549..569 CDD:275368 10/19 (53%)
Sp8NP_001366308.1 SP6-9_N 19..375 CDD:425402 88/434 (20%)
C2H2 Zn finger 379..398 CDD:275368 13/18 (72%)
zf-H2C2_2 390..417 CDD:404364 16/26 (62%)
C2H2 Zn finger 406..428 CDD:275368 13/21 (62%)
zf-H2C2_2 420..443 CDD:404364 12/22 (55%)
zf-C2H2 434..456 CDD:395048 11/21 (52%)
C2H2 Zn finger 436..456 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841529
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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