DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and Sp8

DIOPT Version :10

Sequence 1:NP_995811.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001178703.1 Gene:Sp8 / 299499 RGDID:1307619 Length:504 Species:Rattus norvegicus


Alignment Length:517 Identity:138/517 - (26%)
Similarity:196/517 - (37%) Gaps:160/517 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LLAAPPSAI-SPNPSIGSAGNMTPTSISNSSSISSSNSH--SNSNGNTTGSSNIIASPLSSLG-S 194
            :|||..:.| ||:||        |:|:|:|||..|...|  ..|:.:::||.|::.|.|||.| |
  Rat    19 MLAATCNKIGSPSPS--------PSSLSDSSSSFSKGFHPWKRSSSSSSGSCNVVGSSLSSFGVS 75

  Fly   195 GSTITVSSRNSSAPGIKVRVVQAKNHPGSNARMHLGHVQDFVLPTLTPPSSPESNLRSHNYAQQL 259
            |::....|.:::|.........|.                .|..:.:...||.|:      |..|
  Rat    76 GASRNGGSSSAAAAAAAAAAAAAA----------------LVSDSFSCGGSPGSS------AFSL 118

  Fly   260 EANDLAALIQQQQQQQQQQQQQQQQQQLNPQPGNSTPATAILRFTSQSNPTMTQLQQQQQQLAVQ 324
            .::..||                              |.|.....:.|:|........|      
  Rat   119 TSSSAAA------------------------------AAAAAAAAASSSPFANDYSVFQ------ 147

  Fly   325 HLSISPQALGHSNIGSNSPKSSSSSSSNSSNSS----SSSHSSSSSISG------------SSDQ 373
                :|...|.|..|.......|.:.|..|:..    |..|:|...:.|            |..:
  Rat   148 ----APGVSGGSGGGGGGGGGGSGAHSQDSSHQPVFISKVHTSVDGLQGIYPRVGMAHPYESWFK 208

  Fly   374 PTHSNIPRSTIVRLTTANGKPGAAGISL-----ARVIQMQN-NGNANVAAVLSAAA--------- 423
            |:|..:..:..|         |:||.|.     |..|.:|| ||.|.:...|..||         
  Rat   209 PSHPGLGAAADV---------GSAGASSWWDVGAGWIDVQNPNGAAALPGSLHPAAGGLQTSLHS 264

  Fly   424 -----NSGSSNSNSNSSSSNTSSNSINTA-----------TPQQQVLSQRSEKSANGSS------ 466
                 ||..|..:.::.||..||:.::.|           .|.....|..|..:..|||      
  Rat   265 PLGGYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLAGAGSSMLSAGP 329

  Fly   467 ------KPHHPRQHHSDHS----PDA--------------KRRIHKCQFLGCKKVYTKSSHLKAH 507
                  .|....:.:|..:    |:.              ::.:|.|...||.|||.|:||||||
  Rat   330 AAPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAH 394

  Fly   508 QRTHTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            .|.||||:|:.|:|..|..||.|||||.||.|.|||.|.|.|..|::.|.|||||:.|:|.|
  Rat   395 LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_995811.1 KLF6_7_N-like 2..>82 CDD:409246
COG5048 <455..>559 CDD:227381 49/133 (37%)
C2H2 Zn finger 489..511 CDD:275368 14/21 (67%)
C2H2 Zn finger 519..541 CDD:275368 13/21 (62%)
zf-H2C2_2 533..558 CDD:463886 13/24 (54%)
C2H2 Zn finger 549..569 CDD:275368 10/19 (53%)
Sp8NP_001178703.1 SP8_N 19..375 CDD:411690 89/434 (21%)
C2H2 Zn finger 379..398 CDD:275368 13/18 (72%)
zf-H2C2_2 390..417 CDD:463886 16/26 (62%)
C2H2 Zn finger 406..428 CDD:275368 13/21 (62%)
zf-H2C2_2 420..443 CDD:463886 12/22 (55%)
zf-C2H2 434..456 CDD:395048 11/21 (52%)
C2H2 Zn finger 436..456 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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