DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and hsr1

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_593553.1 Gene:hsr1 / 2543251 PomBaseID:SPAC3H1.11 Length:582 Species:Schizosaccharomyces pombe


Alignment Length:520 Identity:116/520 - (22%)
Similarity:171/520 - (32%) Gaps:178/520 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 APPSAISPNPS---------------------IGSAGNMTPT------SISNSSSISSSNSHSNS 174
            ||..:.||.||                     :.|..|..|.      |::.|.|.||:.||:.:
pombe    27 APAQSSSPLPSNSCREYSLPSHPSTHNSSVAYVDSQDNKPPLVSTLHFSLAPSLSPSSAQSHNTA 91

  Fly   175 NGNTTGSSNIIASPLSSLGSGST--------------------ITVSSRNSSAPGIKVRVVQAKN 219
                     :|..||:|...|::                    .|::|.|::.        |..|
pombe    92 ---------LITEPLTSFIGGTSQYPSASFSTSQHPSQVYNDGSTLNSNNTTQ--------QLNN 139

  Fly   220 H-----PGSNARMHLGHVQDFVLPT----------------------LTPPSSPESNLRSHNYAQ 257
            :     |..|..:....:..:..|:                      |.||.|      ||..|.
pombe   140 NNGFQPPPQNPGISKSRIAQYHQPSQTYDDTVDSSFYDWYKAGAQHNLAPPQS------SHTEAS 198

  Fly   258 Q---------LEANDLAAL----------------IQQQQQQQQQQQQQQQQQQLNPQPGNSTPA 297
            |         .:|.|:.:.                |..|...:.:...|.|...|..||      
pombe   199 QGYMYSTNTAHDATDIPSSFNFYNTQASTAPNPQEINYQWSHEYRPHTQYQNNLLRAQP------ 257

  Fly   298 TAILRFTSQSNPTMTQLQQQQQQLAVQHLSISPQAL--GHSNIGSNSPKS---SSSSSSNSSNSS 357
                ....::.||.......||.      |.:|.||  .::.:.|..|.|   :.||...|:.||
pombe   258 ----NVNCENFPTTVPNYPFQQP------SYNPNALVPSYTTLVSQLPPSPCLTVSSGPLSTASS 312

  Fly   358 SSSHSSSSSISGSSDQPTHSNIPRSTIVRLTTANGKPGAAGISLARVIQMQNNGNANVAAVLSAA 422
            ..|:.|..|:..|.  |::.   ....|.:.:.||  |....|.....|....|:.|....:|..
pombe   313 IPSNCSCPSVKSSG--PSYH---AEQEVNVNSYNG--GIPSTSYNDTPQQSVTGSYNSGETMSTY 370

  Fly   423 ANSGSSNSNSNSSSSNTSSNSINTATPQQQVLSQRSEKSANGSSKPHHPRQHHS-----DHSPDA 482
            .|           .:|||..|.|:....:|:    .....:||.|....||..:     ..||..
pombe   371 LN-----------QTNTSGRSPNSMEATEQI----GTIGTDGSMKRRKRRQPSNRKTSVPRSPGG 420

  Fly   483 KRRIHKCQFLGCKKVYTKSSHLKAHQRT-HTGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKP 546
            |..:  |.  .|.|.:.:|.||:.|.|: ||.|||:.|.   |..||:|.|.|.:|.|.|..|.|
pombe   421 KSFV--CP--ECSKKFKRSEHLRRHIRSLHTSEKPFVCI---CGKRFSRRDNLRQHERLHVNASP 478

  Fly   547  546
            pombe   479  478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 33/98 (34%)
C2H2 Zn finger 489..511 CDD:275368 8/22 (36%)
zf-H2C2_2 503..>519 CDD:290200 9/16 (56%)
C2H2 Zn finger 519..541 CDD:275368 9/21 (43%)
zf-H2C2_2 533..558 CDD:290200 6/14 (43%)
C2H2 Zn finger 549..569 CDD:275368
hsr1NP_593553.1 COG5048 103..582 CDD:227381 96/435 (22%)
zf-C2H2 423..444 CDD:278523 7/24 (29%)
C2H2 Zn finger 425..446 CDD:275368 8/22 (36%)
zf-H2C2_2 437..462 CDD:290200 13/27 (48%)
C2H2 Zn finger 454..473 CDD:275368 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I1951
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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