DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and sptf-1

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001021465.1 Gene:sptf-1 / 172909 WormBaseID:WBGene00009743 Length:298 Species:Caenorhabditis elegans


Alignment Length:397 Identity:96/397 - (24%)
Similarity:141/397 - (35%) Gaps:128/397 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 AISPN-PSIGSAGNMTPTSISNSSSISSSNSHSNSNGNTTGSSNIIAS-----------PLSSLG 193
            |.||. ||..||...|..:...||.|...|:. |...|.|.::::..|           |||.| 
 Worm     4 ASSPRIPSRRSAPYFTSLAFFGSSYIKVKNNR-NKMLNPTDAASVALSFSVPFQMSGENPLSKL- 66

  Fly   194 SGSTITVSSRNSSAPG--IKVRVVQAKNHPGSNARMHLGHVQDFVLPTLTPPSSPESNLRSHNYA 256
                  |...|...||  ||::...||             .:..:|||.....||  .|.:.|:.
 Worm    67 ------VEHCNKFVPGADIKMKAEPAK-------------PESLLLPTDMNAYSP--YLATPNWW 110

  Fly   257 QQLEANDLAALIQQQQQQQQQQQQQQQQQQLNPQPGNSTPATAILRFTSQSNPTMTQLQQQQQQL 321
            ..                               |.|           ..|..||:|         
 Worm   111 VD-------------------------------QTG-----------WPQLYPTVT--------- 124

  Fly   322 AVQHLSISPQALGHSNIGSNSPKSSSSSSSNSSNSSSSSHSSSSSISGSSDQPTHSNIPRSTIVR 386
            ....:.:....|..|.:|.    ..|||.|..::...:..::.|:::.:|.|.|         :.
 Worm   125 TASSVDVYQNYLASSQLGG----LLSSSVSAVASQLPAGINAQSALNITSQQRT---------IA 176

  Fly   387 LTTANGKPGAAGISLARVIQMQNNGNANVAAVLSAAANSGSSNSNSNSSSSNTSSNSINTATPQQ 451
            .:..:.||.|:..|:..|:...|           ::|||..|:.:.:.|:..||.:......|  
 Worm   177 KSFQHTKPMASSSSIPSVLTASN-----------SSANSLVSSGSESVSARGTSGSGGTGKYP-- 228

  Fly   452 QVLSQRSEKSANGSSKPHHPRQHHSD-HSPDA----KRRIHKCQFLGCKKVYTKSSHLKAHQRTH 511
                  |.::||   |...|..|..: ..|:|    ||.:|.|...||.|||.||||||||.|.|
 Worm   229 ------SSRTAN---KCECPNCHEIEKFGPNAIAARKRGVHNCHIAGCGKVYNKSSHLKAHLRWH 284

  Fly   512 TGEKPYK 518
            :||:..|
 Worm   285 SGERQMK 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 30/69 (43%)
C2H2 Zn finger 489..511 CDD:275368 15/21 (71%)
zf-H2C2_2 503..>519 CDD:290200 10/16 (63%)
C2H2 Zn finger 519..541 CDD:275368 96/397 (24%)
zf-H2C2_2 533..558 CDD:290200
C2H2 Zn finger 549..569 CDD:275368
sptf-1NP_001021465.1 zf-C2H2 260..284 CDD:333835 16/23 (70%)
C2H2 Zn finger 262..284 CDD:275370 15/21 (71%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161936
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.030

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