DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and Klf4

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_034767.2 Gene:Klf4 / 16600 MGIID:1342287 Length:483 Species:Mus musculus


Alignment Length:570 Identity:152/570 - (26%)
Similarity:226/570 - (39%) Gaps:176/570 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RDEPKLQKKMHSNLDNPWDIFSTPARLLEELKIKEQHLDTISTTSSVSSNCSGTSWDSNGSQALS 108
            |:|....|::......|:|:.:|.|..||                   |..:|.:..||.     
Mouse    45 REELSHMKRLPPLPGRPYDLAATVATDLE-------------------SGGAGAACSSNN----- 85

  Fly   109 CSVLVKQERIDEEDDDVGCDDKLSVLLAAPPSAISPNPSIGSAGNMTPTSISNSSSISSSNSHSN 173
             ..|:.:...:|.:|.:..|..||       ::::...|:.:       :::.|:|.|||:|.::
Mouse    86 -PALLARRETEEFNDLLDLDFILS-------NSLTHQESVAA-------TVTTSASASSSSSPAS 135

  Fly   174 SNGNTTGSSNIIASPLSSLGSGSTITVSSRNSSAPGIKVRVVQAKNHPGSNARMHLGHVQDFVLP 238
            |...:..|:...:.|:.:.|.             ||     |.|.|..|...         :...
Mouse   136 SGPASAPSTCSFSYPIRAGGD-------------PG-----VAASNTGGGLL---------YSRE 173

  Fly   239 TLTPPSSPESNLRSHNYAQQLEANDLAALIQQQQQQQQQQQQQQQQQQLNPQPGNSTPATAILRF 303
            :..||::|      .|.|   :.||                       ::|..|.   ...:|| 
Mouse   174 SAPPPTAP------FNLA---DIND-----------------------VSPSGGF---VAELLR- 202

  Fly   304 TSQSNPTMTQLQQQQQQLAVQHLSISPQALGHSNIGSNSPKSSSSSSSNSSNSSSSSHSSSSSIS 368
                 |.:..:....||         ||..|...:|....|:|.:       :..|.:||.|.||
Mouse   203 -----PELDPVYIPPQQ---------PQPPGGGLMGKFVLKASLT-------TPGSEYSSPSVIS 246

  Fly   369 GSSDQPTHSNIPRSTIVRLTTANGKPGAAGISLARVIQMQNNGNANVAAVLSAAANSGSSNSNSN 433
            .|...|..|:    .:|....:.|.|     .:...|:.:...:..|:..|.|..::|...||.:
Mouse   247 VSKGSPDGSH----PVVVAPYSGGPP-----RMCPKIKQEAVPSCTVSRSLEAHLSAGPQLSNGH 302

  Fly   434 SSSSN-------TSSNSINTATPQQ-------------------------------QVLSQ---- 456
            ..:::       ..:.:..|.:|::                               |:.||    
Mouse   303 RPNTHDFPLGRQLPTRTTPTLSPEELLNSRDCHPGLPLPPGFHPHPGPNYPPFLPDQMQSQVPSL 367

  Fly   457 -RSEKSANGSSKPHHPRQHHSDHS-PDAKRRIHKCQFLGCKKVYTKSSHLKAHQRTHTGEKPYKC 519
             ..|....||..|..|:......| |..:...|.|.:.||.|.||||||||||.|||||||||.|
Mouse   368 HYQELMPPGSCLPEEPKPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHC 432

  Fly   520 SWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRH 569
            .|:||.|:||||||||||||||||.:||:|:.|||.||||||||||||||
Mouse   433 DWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 62/109 (57%)
C2H2 Zn finger 489..511 CDD:275368 15/21 (71%)
zf-H2C2_2 503..>519 CDD:290200 14/15 (93%)
C2H2 Zn finger 519..541 CDD:275368 17/21 (81%)
zf-H2C2_2 533..558 CDD:290200 18/24 (75%)
C2H2 Zn finger 549..569 CDD:275368 16/19 (84%)
Klf4NP_034767.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..42
9aaTAD. /evidence=ECO:0000250|UniProtKB:O43474 99..107 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..395 15/100 (15%)
Interaction with ZNF296. /evidence=ECO:0000269|PubMed:24161396 386..483 67/97 (69%)
COG5048 <395..478 CDD:227381 59/82 (72%)
zf-C2H2 400..424 CDD:278523 16/23 (70%)
C2H2 Zn finger 402..424 CDD:275368 15/21 (71%)
C2H2 Zn finger 432..454 CDD:275368 17/21 (81%)
Interaction with target DNA 443..474 24/30 (80%)
zf-H2C2_2 446..471 CDD:290200 18/24 (75%)
C2H2 Zn finger 462..482 CDD:275368 16/19 (84%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841558
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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