DRSC/TRiP Functional Genomics Resources

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Protein Alignment luna and klf12

DIOPT Version :9

Sequence 1:NP_001260879.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_002931986.2 Gene:klf12 / 100491204 XenbaseID:XB-GENE-980881 Length:358 Species:Xenopus tropicalis


Alignment Length:319 Identity:122/319 - (38%)
Similarity:171/319 - (53%) Gaps:80/319 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 QLQQQQQQLAVQHLSISPQALGHSNIGSNSPKS-SSSSSSNSSNSSSSSHSSSSSISGSSDQPTH 376
            |.|.:...|::.....||:.:      |:||.| ::|::|.|||||||..:||.::  .:..|:.
 Frog    57 QTQTEPVDLSINKARTSPRGV------SSSPVSITTSAASPSSNSSSSRPTSSPTV--ITPVPST 113

  Fly   377 SNIPRSTIVR----LTTANGKPGAAGISLARVI------QMQNNGNA----------NVAAVLSA 421
            :::|  |::.    :.:|:|..|...:.:...:      .:|:|..:          :|..|.:|
 Frog   114 ASVP--TVLTPGPLVASASGVGGQQFLHIIHPVPPTSPLNLQSNKLSHVHRIPVVVQSVPVVYTA 176

  Fly   422 AANSGSSNS----------------------------NSNS-----------SSSNTSSNSINTA 447
            ..:.|:.||                            .|:|           |.:.|.|.:::.|
 Frog   177 VRSPGNMNSTIVVPLLEDGRGHLKAHMDSRGLSPRLVKSDSDDDDLPNVTLDSVNETGSTALSIA 241

  Fly   448 TPQQQVLSQRSEKSANGSSKPHHPRQHHSDHSPDA-KRRIHKCQFLGCKKVYTKSSHLKAHQRTH 511
            ...|..:|..|.:|..        ||..|: |||: :||||:|.|.||.||||||||||||:|||
 Frog   242 RAVQDSVSPFSIESTR--------RQRRSE-SPDSRRRRIHRCDFEGCNKVYTKSSHLKAHRRTH 297

  Fly   512 TGEKPYKCSWEGCEWRFARSDELTRHYRKHTGAKPFKCRNCDRCFSRSDHLALHMKRHM 570
            ||||||.|:||||.|:||||||||||||||||.|||||.:|||.||||||||||.:|||
 Frog   298 TGEKPYMCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHM 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lunaNP_001260879.1 COG5048 <455..>559 CDD:227381 70/104 (67%)
C2H2 Zn finger 489..511 CDD:275368 17/21 (81%)
zf-H2C2_2 503..>519 CDD:290200 14/15 (93%)
C2H2 Zn finger 519..541 CDD:275368 18/21 (86%)
zf-H2C2_2 533..558 CDD:290200 20/24 (83%)
C2H2 Zn finger 549..569 CDD:275368 14/19 (74%)
klf12XP_002931986.2 SFP1 <214..352 CDD:227516 84/146 (58%)
C2H2 Zn finger 275..297 CDD:275368 17/21 (81%)
C2H2 Zn finger 305..327 CDD:275368 18/21 (86%)
zf-H2C2_2 319..344 CDD:372612 20/24 (83%)
C2H2 Zn finger 335..355 CDD:275368 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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