DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CheB42b and CheB74a

DIOPT Version :9

Sequence 1:NP_995763.1 Gene:CheB42b / 2768717 FlyBaseID:FBgn0066293 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001027134.1 Gene:CheB74a / 3772073 FlyBaseID:FBgn0261294 Length:202 Species:Drosophila melanogaster


Alignment Length:193 Identity:72/193 - (37%)
Similarity:110/193 - (56%) Gaps:1/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLLLLLGVTSSWATDYELLLEDPDIFSTCTDGPPGSINIRQALNLDDIVIDQKGDILHVSGNATV 68
            :|:.|.....|....:|.:|:|..:||.|.:.|||..|:....::..:..:...:.:|:.|:.|.
  Fly    11 ILIFLTAAQPSIGGYFEYVLDDESVFSECFNTPPGYANVSGLFDVSTVNFEMGPEGVHIDGHVTS 75

  Fly    69 VWDVQPTDRITARLDVFHFNRGTWEPTVFSMATQNFCSIMYDKNQYWYKYWTRFITNRHEVEKKC 133
            .||:||||||..||:|.|.:||||:|||.:|..::||....|.|||||..:.:.|.|:.|..:||
  Fly    76 TWDIQPTDRIEGRLNVVHMDRGTWQPTVLNMVCKDFCKTFLDPNQYWYNVFPKHIINKDEARQKC 140

  Fly   134 FRGPDTVLVHEPFDLILKFENFRGPLLRGRHKLVILFNALDERNIPRPNPICLEIIGEPLKLQ 196
            .....||...||:.|.:.| .....|..||:::||...|:||.|:.|||.||.|:.|:..|::
  Fly   141 LNYKGTVYFVEPYTLQMHF-GLGLTLPSGRNRMVINLVAIDENNVTRPNGICFEVKGDFFKIE 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CheB42bNP_995763.1 DM11 17..180 CDD:128920 61/162 (38%)
CheB74aNP_001027134.1 DM11 26..186 CDD:128920 61/160 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448916
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003852
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.