DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CheB42b and CheB53a

DIOPT Version :9

Sequence 1:NP_995763.1 Gene:CheB42b / 2768717 FlyBaseID:FBgn0066293 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001014530.1 Gene:CheB53a / 3346205 FlyBaseID:FBgn0261292 Length:226 Species:Drosophila melanogaster


Alignment Length:191 Identity:72/191 - (37%)
Similarity:112/191 - (58%) Gaps:3/191 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIFVLLLLLGVTSSWATDYELLLEDPDIFSTCTDGPPGSINIRQALNLDDIVIDQKGDILHVSGN 65
            |:.::|:|..|..|....||..:||..|:|.|:|.|||::||....:|.:.......|.|.||||
  Fly     1 MLELILILNVVHLSLQISYEFEIEDESIYSDCSDVPPGTLNISGLFDLTNYTTTITADGLSVSGN 65

  Fly    66 ATVVWDVQPTDRITARLDVFHFNRGTWEPTVFSMATQNFCSIMYDKNQYWYKYWTRFITNRHEVE 130
            .|.|::.||||||....::..|:||.|:||..:|..::||::||||.|.||..|:..:.||.|::
  Fly    66 MTSVFNAQPTDRIELTGNLLFFDRGAWQPTTLNMMVRDFCAVMYDKKQLWYTDWSSHVVNRDEIK 130

  Fly   131 KKCFRGPDTVLVHEPFDLILKFENFRG-PLLRGRHKLVILFNALDERNIPRPNPICLEIIG 190
            ..|.:.|.|:.:.|.:::.|.|.:  | ||..||:.:.:...|.|::...|||.:|.|:.|
  Fly   131 DNCIKVPGTLFLIESYNMKLVFGS--GIPLGTGRYSIRVQVFAYDQKGKKRPNNVCYEVKG 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CheB42bNP_995763.1 DM11 17..180 CDD:128920 61/163 (37%)
CheB53aNP_001014530.1 DM11 18..179 CDD:128920 61/162 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448934
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2F5QI
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003852
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.830

Return to query results.
Submit another query.