DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mim and CG12964

DIOPT Version :10

Sequence 1:NP_001188869.1 Gene:mim / 2768716 FlyBaseID:FBgn0053558 Length:2028 Species:Drosophila melanogaster
Sequence 2:NP_611040.2 Gene:CG12964 / 36714 FlyBaseID:FBgn0034022 Length:1129 Species:Drosophila melanogaster


Alignment Length:1342 Identity:262/1342 - (19%)
Similarity:407/1342 - (30%) Gaps:474/1342 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 GQHNHSTSTNTNTTS-------PSSGSSTPQNHYSPLLTNSPTSTAAGTPS---GSSLGPGSGLG 623
            |..:.|:||.:.|||       |.:.|..|....||..:.||:|.|..|.:   ..:|.||...|
  Fly    16 GVASSSSSTTSTTTSVKPKTANPKAESDKPTKQPSPSASPSPSSKATNTSTTRQSKALKPGENRG 80

  Fly   624 --FVYQVSSPTPPSSEVLKITEQAAAGQDQGPANSVADETDERSRASVLQKASMFEKAA-----A 681
              .:|                       |.|.|..:..|...|....|...||.:.:..     :
  Fly    81 KRTLY-----------------------DFGNAGYLYPEVASRRAGYVDNAASYYPQTGYYNGQS 122

  Fly   682 AAAVSPPAPMQIASGSPASGGGTRRSEAEQQEMDKSFEDSIQALNNLIGELDSFQREIDEGKVKP 746
            |.|..|      .|..||.....:..||.:..::...:|:    |..:.|             :|
  Fly   123 AVAQYP------GSFGPAYAQYPQYLEAPEPIIEIIIKDA----NETLAE-------------EP 164

  Fly   747 PSNIISGSTTSSNNNNTTTSSISSSDNNNLPATSNIEPCAISNQTNSSGCGTDISDTTSDELAGD 811
            ...|::.........:....:.....||.|...|.|  .:::|..|                   
  Fly   165 AQPIVTKKKKKKEKVHVFYVNYKKDQNNKLHLESPI--ASLNNDDN------------------- 208

  Fly   812 DMDVRRRDRDRDRDLLGASDSELSRCYVSETSSLTGGLTAGGYENPTFAHFAANANREDAVSLAS 876
                 ..:.:.:.:::....:.|..  |..|:..|                              
  Fly   209 -----EEEEEEEEEVIQYPVTPLPP--VKSTTLRT------------------------------ 236

  Fly   877 DSVCLGQPRHAYVDTCSDSGSAVVVIYDHQIPNTPDIEFVKQNSEIVV---LRTKDPQPHALQLH 938
                                    :|:       ||.|....||.|.|   ...|....|.|:.|
  Fly   237 ------------------------IIH-------PDSEKYHSNSGIHVSFGAENKHQTGHILEEH 270

  Fly   939 EMRELQQ----LPANLAGSPDSS-----------PDSAGGQAPPTATVAPAKQRLSSFRATSEQQ 988
            :...:|:    ||.:::...:.|           .::.|.:..|.:.:........|.....:||
  Fly   271 DAESIQRQVVALPPSVSSKSEVSYVSNTRADYGRENNFGSRPGPISNMLFGSNYQQSGINYQQQQ 335

  Fly   989 LQLLGRGSPQRGKTPSEQAVQSRPQDQHFPQTQQQDIDGSSPPVELARRQLPPKPTSLSIFNGPV 1053
            .||..:.|....:.||  |:...|.:...|..|||......|  .:.::|| |..:|.:|||..|
  Fly   336 QQLPTQHSNNYFRPPS--ALVGPPPNYPKPAPQQQVQQPHRP--SITQQQL-PSTSSQTIFNKLV 395

  Fly  1054 PTAGDRPVVPRKSDFKADLDAKIRRQKQKVKQQLQQQQQQQQQEQQETQQQQQAPQEQQHS-PQS 1117
                      ::|.|..:.:.:. .|:|..:||.|||.||||.:||:.|||.|..|:.||. .|:
  Fly   396 ----------QQSQFYINHNQQY-PQQQHQQQQHQQQHQQQQHQQQQHQQQHQYQQQHQHQHHQA 449

  Fly  1118 PQTRNCNVTNQQAANITASASAFATATASTDPYPNPNHRMPNQNQTATSNHTQCKTPTMALSPSS 1182
            ||      .:||.|                          |.|.|.....|.|.:.|.....|  
  Fly   450 PQ------QHQQQA--------------------------PQQQQYQKPPHKQVQVPFFPTIP-- 480

  Fly  1183 PRGHLPLSSSSLSSLPLPATTSSPSNARPSMLPAS------DRPPAHPYVCSNAPANPHHANSIS 1241
            |:...|.....:...|.||..:.   |:|..||..      .:.....|........||...|..
  Fly   481 PKSVTPAPYQPVKFRPTPAPVAP---AKPVPLPVKLDNANYQQQQQQHYQPQQQQKLPHQQQSYQ 542

  Fly  1242 NANAHLKPCITPRPASLSGGAAGGGSTRIGRRSSINQSKPPPPVRRSSSVTPSPNASVGLQQQPQ 1306
            ...   :|....:|                  ..:.:|..|||...|..           :||.|
  Fly   543 FVR---QPQFVQQP------------------QFVVRSPTPPPEYYSQQ-----------KQQTQ 575

  Fly  1307 HATLSQQNHQLSSSSEHLPPPPPFMLDAMPQIPSSALKVSETVRALAAMRHQPASPVSLRRMQQQ 1371
                 ||:||  |:..:....|....:.:..||.....::|||:          :|::..:..||
  Fly   576 -----QQHHQ--SALNYFDIKPSKETELLKSIPKFEQHITETVQ----------NPIATAQQPQQ 623

  Fly  1372 QQQQLQQQQQQQVQQQQPLLQSAHNSPLKEDLTVYYDSYLDLHAYAQALASG----QQPGGQQMA 1432
            |..|.|.|||||........:..|:.| ..:|......::..| |..|.:||    ||.|....|
  Fly   624 QYHQQQVQQQQQFGYSSTRNEVIHDVP-APNLGPTAQQHISGH-YITAGSSGVQQSQQFGSFPSA 686

  Fly  1433 NQQRFTLQQQHQHLHQPQQPPVYQVDATFRTSSPAAGGGGGGGIYAQPKLVNSMSSFRTSSPSPN 1497
            :               |.||||| .::|                :.|..:|              
  Fly   687 S---------------PTQPPVY-AEST----------------HGQKVMV-------------- 705

  Fly  1498 GHAHPLPPT---------QPKANPNLI------AQLNARLSGK--QQQHQQQQHIEGIYGNQQAP 1545
              ..|:||:         ...||..::      |.|.|:.|..  ||..|....:........:|
  Fly   706 --VTPVPPSSNYVTYSQYSQTANEPVVHINAQSAALQAQASTNFAQQPRQPASSLISAPSTDNSP 768

  Fly  1546 GGESIYMRSGLSMSQPQQQQHFDGKSEQIQLQHQQQHRIYASFGTSSSAMSSAHAANSSTKPSIL 1610
            ...|.| .|.:.....|:.|.....|:|:|.|.||          .::|.:||         |:.
  Fly   769 FSVSTY-HSDVFKELEQRNQKDKKVSQQVQQQAQQ----------IAAAPASA---------SVP 813

  Fly  1611 TPTTSFNALPHFPLSSSTSSLLSKVSSFSNSSSASPPTTAATSGSASSHYQPPQPPNAAVANSKD 1675
            .||                               |.|.||....::.:..|.|.    .|.:...
  Fly   814 APT-------------------------------STPATAPNGKASQTLLQLPD----EVPDDLR 843

  Fly  1676 MAIYSSSFTKNPAAAQSPNMRQAHSHQHHQPPQQ-QHYTCPPPLEDPPPPPIYAAGASA------ 1733
            ..::||....|...:.....:|......:.|.:. ||:              |.||..|      
  Fly   844 QQLFSSGILNNADISILDYDKQGDIALENLPAEHLQHF--------------YGAGGGAQIAETN 894

  Fly  1734 ---------------------------TMPK------KMARPPTGQNATHSSAYAAASSTATLPK 1765
                                       ::|:      |:.|....|..:.|..|....:|...|.
  Fly   895 KVLTVVKPNGDKVALSEKQLDRVKQTNSLPQKQDLDVKVVRYDAAQGQSVSDKYVRTDATVVTPV 959

  Fly  1766 NMMQQQQRLQHQQQYQQPAGMGIGNGNGHLGQRPQLPLPQQK 1807
            :       |..:|||.:...:.|   ||     .|.|:|..:
  Fly   960 D-------LAERQQYNRYLPLKI---NG-----AQFPIPDSE 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mimNP_001188869.1 I-BAR_IMD_MIM 7..238 CDD:153327
CG12964NP_611040.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.