DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir41a and grik1a

DIOPT Version :9

Sequence 1:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:615 Identity:112/615 - (18%)
Similarity:189/615 - (30%) Gaps:204/615 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RFVNAFNKASVYSIWRSLHNKFVFAHIANESPESRNHFFED------------------QPNILF 152
            ||:|.|.:|.    |..|..:.|.    |::...|..|..|                  :||.|:
Zfish   361 RFMNLFKEAQ----WDGLTGRIVL----NKTDGLRKEFNLDLISLKEDGTAKRVADGASRPNKLW 417

  Fly   153 ----VVRDHSSASSFDIKTNKFVGRKAENPSQMILVDRYLASEQRFQFGKSLFADKLNNLQGREV 213
                |...::..:..:||.||.:                              .|.|.|   |.:
Zfish   418 TKIGVWNSYTGLNLTEIKDNKNI------------------------------TDSLAN---RTL 449

  Fly   214 IIAGFDYPPYTVIKHNMSTNAQDMGVSGESDFKNVYID-GTETRIVLNFCEQFNCTIQIDSSAAN 277
            |:......||.:.|.:      |..:.|...|:...:| ..|...:|.|..:..........|.|
Zfish   450 IVTTILENPYVMYKKS------DKVLYGNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQN 508

  Fly   278 DWGKVYPNMSGDGALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCLVPAP----LRL 338
            |.|:      .:|.:..||:..||:.:..:...|.....:|.|...:..||:.|...|    ..:
Zfish   509 DKGE------WNGMVRELIDHIADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGV 567

  Fly   339 TSWYLPLEPFKETLWAAILL-CLCAEATGLVLAYKSEQALYVLPGYREGWW----TCTS------ 392
            .|:..||.|   .:|..:|| ||....           .|:|:..:....|    .|..      
Zfish   568 FSFLNPLTP---DIWMYVLLACLGVSC-----------VLFVIARFTPYEWYNPHPCNPSSEVVE 618

  Fly   393 ----------FGVCTTFKLFISQSGNSKAYSLTVRVLLFACFLNDLIITSIYGGGLASILTIPSM 447
                      |||....:    |.......:|:.|:|....:...|||.|.|...||:.||:..|
Zfish   619 NNFTLLNSLWFGVAALMR----QGSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVERM 679

  Fly   448 DEAADTV------TRLR------------FHRLQWAANSEAWVSAIRASDEALVKDILYNFHIYS 494
            |...|:.      ||:.            |.:.:.:...:.|.......:.||||:        |
Zfish   680 DSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKN--------S 736

  Fly   495 DDELLRLAQDQH-------------------MRIGFTVERLPFGHFAIGNYLGPQAIDQLVIMKD 540
            .|.:.|:....:                   .::|..::...:|   :|..:|....|::.|...
Zfish   737 KDGITRVLTTDYALLMESTSIEYITQRNCNLTQVGGLIDSKGYG---VGTPIGSPYRDKVTIAIL 798

  Fly   541 DIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSGFDKYWEYRVVADNLNLKIQQQVQETMTGTKDIG 605
            .:..:..:..:...|            |..:|..                ::..:|...      
Zfish   799 QLQEEGKLHMMKEKW------------WRGNGCP----------------EEDSKEASA------ 829

  Fly   606 PVPLGMSNFAGFIIVWILGSAIATLTFLLE 635
               ||:.|..|..||...|..::....:.|
Zfish   830 ---LGVENIGGIFIVLAAGLVLSVFVAIGE 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir41aNP_995744.4 None
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 16/78 (21%)
ANF_receptor 57..398 CDD:279440 12/44 (27%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 79/424 (19%)
Lig_chan 577..846 CDD:278489 55/331 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591598
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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