DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir41a and grik1a

DIOPT Version :10

Sequence 1:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_009303592.2 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:615 Identity:112/615 - (18%)
Similarity:189/615 - (30%) Gaps:204/615 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RFVNAFNKASVYSIWRSLHNKFVFAHIANESPESRNHFFED------------------QPNILF 152
            ||:|.|.:|.    |..|..:.|.    |::...|..|..|                  :||.|:
Zfish   361 RFMNLFKEAQ----WDGLTGRIVL----NKTDGLRKEFNLDLISLKEDGTAKRVADGASRPNKLW 417

  Fly   153 ----VVRDHSSASSFDIKTNKFVGRKAENPSQMILVDRYLASEQRFQFGKSLFADKLNNLQGREV 213
                |...::..:..:||.||.:                              .|.|.|   |.:
Zfish   418 TKIGVWNSYTGLNLTEIKDNKNI------------------------------TDSLAN---RTL 449

  Fly   214 IIAGFDYPPYTVIKHNMSTNAQDMGVSGESDFKNVYID-GTETRIVLNFCEQFNCTIQIDSSAAN 277
            |:......||.:.|.:      |..:.|...|:...:| ..|...:|.|..:..........|.|
Zfish   450 IVTTILENPYVMYKKS------DKVLYGNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQN 508

  Fly   278 DWGKVYPNMSGDGALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCLVPAP----LRL 338
            |.|:      .:|.:..||:..||:.:..:...|.....:|.|...:..||:.|...|    ..:
Zfish   509 DKGE------WNGMVRELIDHIADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGV 567

  Fly   339 TSWYLPLEPFKETLWAAILL-CLCAEATGLVLAYKSEQALYVLPGYREGWW----TCTS------ 392
            .|:..||.|   .:|..:|| ||....           .|:|:..:....|    .|..      
Zfish   568 FSFLNPLTP---DIWMYVLLACLGVSC-----------VLFVIARFTPYEWYNPHPCNPSSEVVE 618

  Fly   393 ----------FGVCTTFKLFISQSGNSKAYSLTVRVLLFACFLNDLIITSIYGGGLASILTIPSM 447
                      |||....:    |.......:|:.|:|....:...|||.|.|...||:.||:..|
Zfish   619 NNFTLLNSLWFGVAALMR----QGSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVERM 679

  Fly   448 DEAADTV------TRLR------------FHRLQWAANSEAWVSAIRASDEALVKDILYNFHIYS 494
            |...|:.      ||:.            |.:.:.:...:.|.......:.||||:        |
Zfish   680 DSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKN--------S 736

  Fly   495 DDELLRLAQDQH-------------------MRIGFTVERLPFGHFAIGNYLGPQAIDQLVIMKD 540
            .|.:.|:....:                   .::|..::...:|   :|..:|....|::.|...
Zfish   737 KDGITRVLTTDYALLMESTSIEYITQRNCNLTQVGGLIDSKGYG---VGTPIGSPYRDKVTIAIL 798

  Fly   541 DIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSGFDKYWEYRVVADNLNLKIQQQVQETMTGTKDIG 605
            .:..:..:..:...|            |..:|..                ::..:|...      
Zfish   799 QLQEEGKLHMMKEKW------------WRGNGCP----------------EEDSKEASA------ 829

  Fly   606 PVPLGMSNFAGFIIVWILGSAIATLTFLLE 635
               ||:.|..|..||...|..::....:.|
Zfish   830 ---LGVENIGGIFIVLAAGLVLSVFVAIGE 856

Return to query results.
Submit another query.