DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir41a and Ir40a

DIOPT Version :9

Sequence 1:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:694 Identity:133/694 - (19%)
Similarity:250/694 - (36%) Gaps:164/694 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IDTGLKKKELQNKHLFLDELVIKI----IISIEVTHCETFVVFDKDIDRFVNAFNKA------SV 116
            :..|:.:||   ::::||:.:.::    ..|:..:..|   :|.:.|:..:...|:.      ..
  Fly    58 LSDGVCQKE---RNVYLDDFLQRLHRSNYKSVVFSQTE---LFFQHIEENLQGANECISLILDEP 116

  Fly   117 YSIWRSLHNK--------FVFAHIANESPESRNHFFEDQPNILFVVRDHSSASSFDIKTNKFVGR 173
            ..:..|||::        |:|...|...|.||...|.:...::.|.|....|  |.|..|:   .
  Fly   117 NQLLNSLHDRHLGHRLSLFIFYWGARWPPSSRVIRFREPLRVVVVTRPRKKA--FRIYYNQ---A 176

  Fly   174 KAENPSQMILVDRYLASE---QRFQF---GKSLFADKLNNLQGREVIIAGFDYPPYTVIKHNMST 232
            :..:.||:.||:.|....   ||...   ..|::|    |.:||...:..|..||:..:.:..::
  Fly   177 RPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYA----NFKGRTFRVPVFHSPPWFWVTYCNNS 237

  Fly   233 NAQDMGVSGESDFKNV---------YIDGTETRIVLNFCEQFNCTIQIDSSAANDWGKVY----- 283
            ..:|      .:|.::         ...|.:.|:::...:..|...:...:.....|.:.     
  Fly   238 FEED------EEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYIEAPGRTQGSMRSEDGK 296

  Fly   284 -PNMSGDGALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCLVPAPLRLTSWYLPLEP 347
             .|.|..|.:|:|.:.:||..:|.:...:|....::.|.:.:.........||.||......:.|
  Fly   297 DSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLNEALAIMRP 361

  Fly   348 FKETLWAAILLCL--------------------------------------CAEATGLVLAYKSE 374
            ||:.:|..::|.:                                      ..|.|..:|..|..
  Fly   362 FKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEHLGELYIHMTYLKEITPRLLKLKPR 426

  Fly   375 QALYVLPGYREGWWTCTSFGVCTTFKLFISQSGNS-----KAYSLTVRVLLFACFLNDLIITSIY 434
            ..|.......:.:..|..|    |.:||:.||.|.     :|..||:...:.|.:    ::..:|
  Fly   427 TVLSAHQMPHQLFQKCIWF----TLRLFLKQSCNELHNGYRAKFLTIVYWIAATY----VLADVY 483

  Fly   435 GGGLASILTIPSMDEAADTVTRLRF------HRLQWAANSEAWVSAIRASDE------ALVKDIL 487
            ...|.|....|:.:...:|:.||:.      :|| :.....:.:..:....|      ||::..:
  Fly   484 SAQLTSQFARPAREPPINTLQRLQAAMIHDGYRL-YVEKESSSLEMLENGTELFRQLYALMRQQV 547

  Fly   488 YN----FHIYSDDELLRL----AQDQHMRIG-----FTVERLPFGHFAIGNYLGPQAIDQLVIMK 539
            .|    |.|.|.:..::|    .:|:.:..|     |.|::....:|.:...|            
  Fly   548 INDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLSQKL------------ 600

  Fly   540 DDIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSG-FDKYW------EYRVVADNLNLK--IQQQVQ 595
               |.:|:...|....|.|..||.::.....|| .||..      :|:.|......|  :|.:..
  Fly   601 ---YTRYSAVAVQIGCPFLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIYKGSVQAKNS 662

  Fly   596 ETMTGTKDIGPV---PLGMSNFAGFIIVWILGSAIATLTFLLEL 636
            |..:.|:.....   ||.:....|..|...:||..|.:..|||:
  Fly   663 EAYSRTESYDSTVISPLNLRMLQGAFIALGVGSLAAGVILLLEI 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir41aNP_995744.4 None
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 20/127 (16%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 19/93 (20%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/156 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462995
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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