Protein Alignment Ir41a and GluRIIA

DIOPT Version :9

• Sequence 1: NP_995744.4
• Gene: Ir41a / 2768714
• FlyBaseID: FBgn0040849
• Length: 648
• Species: Drosophila melanogaster
• Sequence 2: NP_523484.2
• Gene: GluRIIA / 33788
• FlyBaseID: FBgn0004620
• Length: 907
• Species: Drosophila melanogaster
• Alignment Length: 550
• Identity: 103/550 - (18%)
• Similarity: 191/550 - (34%)
• Gaps: 152/550 - (27%)

  Fly    30 DKFEFQLLHKSDYISFVGINIKSFDDNGGHYIIDTGLKKKELQNKHLFLD------ELVIKIIIS 88
            |....|.|: |||     :.:::..|....|.|......:....:.:.||      :.::|:.|.
  Fly   181 DLMNIQALN-SDY-----VKLRNLADYADDYRILWKETDETFHEQRIILDCEPKTLKELLKVSID 239

  Fly    89 IE---------VTHCETF-----VVFDKDIDRFV----------NAF--NKASVYSIWRSLHNK- 126
            .:         :||.:|.     .::::|....:          |.|  .|..:..:.:.|.|:
  Fly   240 FKLQGPFRNWFLTHLDTHNSGLRDIYNEDFKANITSVRLKVVDANPFERKKTRLTKVDQILGNQT 304

  Fly   127 ----------FVFAHIANE--------SPESRNHFFEDQPNIL--FVVRDHSSASSFDIKTNKFV 171
                      .:||..|..        .|.:| |.....|.:|  |:|.:..:.|..|::.:
  Fly   305 MLPILIYDAVVLFASSARNVIAAMQPFHPPNR-HCGSSSPWMLGAFIVNEMKTISEDDVEPH--- 365

  Fly   172 GRKAENPSQMILVDRYLASEQRFQFGKSLFADKLN--------------NLQGREVIIAGF--DY 220
             .|.||    :.:|.|   .||..|...::...:|              .|...|:..||.  |:
  Fly   366 -FKTEN----MKLDEY---GQRIHFNLEIYKPTVNEPMMVWTPDNGIKKRLLNLELESAGTTQDF 422

  Fly   221 PP----YTVIKH------NMSTNAQDMGVSGESDFKNVYIDGTETRIVLNFCE--QFNCTIQIDS 273
            ..    |||:.|      .|..:.::.  .|...::...:|     ::....|  :|:....|
  Fly   423 SEQRKVYTVVTHYEEPYFMMKEDHENF--RGREKYEGYAVD-----LISKLSELMEFDYEFMI-- 478

  Fly   274 SAANDWGKVYP-NMSGDGALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCL-VPAPL 336
              .|..||..| ....||.:..||:..|.|.:..:.......:.:|.::..::.||:.| ..:|.
  Fly   479 --VNGNGKYNPETKQWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPP 541

  Fly   337 RLTSWYLPLEPFKETLWAAILLCLCAEATGLV----LAYKS----EQALYVLPGYREGWWTCTSF 393
            ...:.:..||||...:|..::..........|    |:|:.    ..|:.. |...|..|...:
  Fly   542 EPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLSYREWLPPNPAIQD-PDELENIWNVNN- 604

  Fly   394 GVCTTFKLF--ISQSG-NSKAYSLTVRVLLFACFLNDLIITSIYGGGLASILTIPSMDEAADTVT 455
               :|:.:.  |.|.| :.......:|:|....:...|::.|.|...||:.||
  Fly   605 ---STWLMVGSIMQQGCDILPRGPHMRILTGMWWFFALMMLSTYTANLAAFLT------------ 654

  Fly   456 RLRFHRLQWAANSEAWVSAIRASDEALVKD 485
                        |..|.|:|::..:.:.:|
  Fly   655 ------------SNKWQSSIKSLQDLIEQD 672

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir41a	NP_995744.4	None
GluRIIA	NP_523484.2	PBP1_iGluR_Kainate	33..404	CDD:107377	43/240 (18%)
		ANF_receptor	46..386	CDD:279440	42/222 (19%)
		PBP2_iGluR_Kainate	426..796	CDD:270432	54/286 (19%)
		Lig_chan	556..828	CDD:278489	25/145 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45462643
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930