DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir41a and GRIN2A

DIOPT Version :10

Sequence 1:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:252 Identity:56/252 - (22%)
Similarity:98/252 - (38%) Gaps:35/252 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 IKHNMSTNAQDMGVSGESDFKNVYIDGTETRIVLNFCEQFNCTIQIDSSAANDWGKVYPNMSGDG 290
            :|.|.|||.   |::.:...|...||     |:.........|..:........||...|: .:|
Human   492 VKINNSTNE---GMNVKKCCKGFCID-----ILKKLSRTVKFTYDLYLVTNGKHGKKVNNV-WNG 547

  Fly   291 ALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCLVPAPLRLTSWYLPLEPFKETLWAA 355
            .:|.::.::|.:.:|::....|....:|.|:..|.:||:.:|.......|....||||..::|..
Human   548 MIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVM 612

  Fly   356 ILLCLCAEATGLVLAYKSEQALYVLP-GYR---------EGWWTCTSFGVCTTFKLFISQS---G 407
            :.:.|...:...|..::     |..| ||.         .|........:...:.|..:.|   .
Human   613 MFVMLLIVSAIAVFVFE-----YFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQ 672

  Fly   408 NSKAYSLTVRVLLFACFLNDLIITSIYGGGLASILTIPSMDEAADTVTRL---RFHR 461
            |.|..:..:.|.::|.|.  :|..:.|...||:.:.   .:|..|.||.|   :|.|
Human   673 NPKGTTSKIMVSVWAFFA--VIFLASYTANLAAFMI---QEEFVDQVTGLSDKKFQR 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir41aNP_995744.4 None
GRIN2AXP_016878661.1 PBP1_iGluR_NMDA_NR2 84..439 CDD:380601
PBP2_iGluR_NMDA_Nr2 455..854 CDD:270436 56/252 (22%)
NMDAR2_C 891..1516 CDD:463148
Blue background indicates that the domain is not in the aligned region.

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