DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir41a and GRID1

DIOPT Version :10

Sequence 1:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:774 Identity:142/774 - (18%)
Similarity:250/774 - (32%) Gaps:250/774 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IFWNDKFEFQLLHK-SDYISFVG--INIKSFDDNGGHYI--IDTGLKKKEL-------------- 71
            :|::.:::.:.|.. .|..|.:|  ::::..|.|..|..  :.|.:|.:||              
Human   167 MFYDSEYDIRGLQSFLDQASRLGLDVSLQKVDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLL 231

  Fly    72 --QNKHLFLDELVIKIIIS-----------------IEVTH------------------------ 93
              |..|.|::|.|...:.|                 :::.|                        
Human   232 SPQGAHSFINEAVETNLASKDSHWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCTR 296

  Fly    94 ---------CE------------TFVVFDKDIDRFVNAFNK----------ASVYSI------W- 120
                     |:            ...::| .:....|||::          ||:..|      | 
Human   297 NNHRISSLLCDPQEGYLQMLQISNLYLYD-SVLMLANAFHRKLEDRKWHSMASLNCIRKSTKPWN 360

  Fly   121 --RSLHNKFVFAHIANESPESRNHFFED--QPNILFVVRDHSSASSFDIKTNKFVGRKAENPSQM 181
              ||:.:.....||...:  ....|.||  .|.:.|.:...:.:.:|.....|.....:|.....
Human   361 GGRSMLDTIKKGHITGLT--GVMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDSEKGLNG 423

  Fly   182 ILVDRYLASEQRFQFGKSLFADKLNNLQGREVIIAGFDYPPYTVIKHNMSTNAQDMGVSGESDFK 246
            .|.:|.:.|                .|||..:.:......|:.::..|:        :.....:|
Human   424 SLQERPMGS----------------RLQGLTLKVVTVLEEPFVMVAENI--------LGQPKRYK 464

  Fly   247 NVYIDGTETRIVLN-FCEQFNCTIQIDSSAANDWGKVYPNMSGDGALGMLINRKADICIGAMYSW 310
            ...||      ||: ..:......:|..:....:|....|.|.:|.:|.||:::||:.|.|:...
Human   465 GFSID------VLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITIT 523

  Fly   311 YEDYTYLDLSMYLVRSGITCLVPAPLRLTSWYLPLEPFKETLWAAILLCLCAEATGLVL------ 369
            .|..:.:|.|...:...:..|:..|....|.:....||...:||.|...:  ...|:::      
Human   524 PERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIAAAI--PVVGVLIFVLNRI 586

  Fly   370 -AYKSEQALYVLPGYREGWWTCTSFGVCTTFKLFISQSGNSKAYSLTVRVLLFACFLNDLIITSI 433
             |.:::.|....|....   |..| .:...:..|:.|.|.|...|:.:|:::.:.:|..||:.|.
Human   587 QAVRAQSAAQPRPSASA---TLHS-AIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTLIVCSS 647

  Fly   434 YGGGLASILTIPSMDEAADTVTRL-----------------RFHRL-------QWAANSEAW--V 472
            |...||:.||:..||....|...|                 .:.|.       |.:..:|.|  :
Human   648 YTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTI 712

  Fly   473 SAIRASDEALVKDILYNFHIYSDDELLRLAQDQHMRIGFTVERLPFGHFAIGNYLGPQAIDQLVI 537
            |....:|..          :.|..|.:|.|:.              |::|   :|...|:.:...
Human   713 SKNGGADNC----------VSSPSEGIRKAKK--------------GNYA---FLWDVAVVEYAA 750

  Fly   538 MKDD-----------------IYFQ----YTVAFVPRLWPLLD--KLNTLIYSW--HSSGFDKYW 577
            :.||                 |..|    |...|..|:..|.|  .|:.|...|  |....|...
Human   751 LTDDDCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTS 815

  Fly   578 EYRVVADNLNLKIQQQVQETMTGTKDIGPVPLGMSNFAGFIIVWILGSAIATLTFLLEL 636
            .....||..:||:.                     :|||...:..:|..:|.|...|||
Human   816 HASAQADGKSLKLH---------------------SFAGVFCILAIGLLLACLVAALEL 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir41aNP_995744.4 None
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 44/287 (15%)
PBP1_iGluR_delta_1 25..425 CDD:380615 40/260 (15%)
PBP2_iGluR_delta_1 436..806 CDD:270448 82/416 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.

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