Sequence 1: | NP_995744.4 | Gene: | Ir41a / 2768714 | FlyBaseID: | FBgn0040849 | Length: | 648 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001263284.1 | Gene: | Grin3a / 242443 | MGIID: | 1933206 | Length: | 1135 | Species: | Mus musculus |
Alignment Length: | 627 | Identity: | 124/627 - (19%) |
---|---|---|---|
Similarity: | 213/627 - (33%) | Gaps: | 188/627 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 147 QPNILFVVRDHSSASSFDIKT-----NKFVGRKAENP-------SQMILVDRYLASEQRF----- 194
Fly 195 ---QFGKSLFADKLNNLQGREVII-------------AGFDYP------PYTVIKHN--MSTNAQ 235
Fly 236 DMGV--SG--------------ESDFKNVYIDGTETRIVLNFCEQFNCTIQIDSSAANDW----- 279
Fly 280 ------GK--VYPNMSGDGALGMLINRKADIC-----IGAMYSWYEDYT--YLDLSM-YLVRSGI 328
Fly 329 TCLVPAPLRLTSWYLPLEPFKETLWAAILLCLCAEATGLVLAYKSEQALYVLPGYREGWWTCTSF 393
Fly 394 GVCTTFKLFISQSGNSKAYSL--------------TVRVL--LFACFLNDLIITSIYGGGLASIL 442
Fly 443 TIPSMDEAADTVTRLRFHRLQWAANSEAWVSAIRASDEALVKDILYNFHIYSDDELLRLAQDQHM 507
Fly 508 RIGFTVERLPFGHFAIGNYLGPQAIDQLVIMKDDIYFQYTVAF---------------------V 551
Fly 552 PRLWPLLDKLNTLIYSWHSSGF-----DKYWEYRVVADNLNLKIQQQVQETMTGTKDIGPVPLGM 611
Fly 612 SNFAGFIIVWILGSAIATLTFLLE-----LSLTYILKQSNLK 648 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir41a | NP_995744.4 | None | |||
Grin3a | NP_001263284.1 | PBP1_iGluR_NMDA_NR3 | 30..497 | CDD:107372 | 17/93 (18%) |
PBP2_iGluR_NMDA_Nr3 | 512..908 | CDD:270438 | 86/442 (19%) | ||
Lig_chan | 676..942 | CDD:278489 | 62/315 (20%) | ||
PPP2CB binding site. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 951..987 | 6/20 (30%) | |||
GIT1-binding. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 1082..1115 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846518 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |