Protein Alignment Ir41a and Grin3b

DIOPT Version :9

• Sequence 1: NP_995744.4
• Gene: Ir41a / 2768714
• FlyBaseID: FBgn0040849
• Length: 648
• Species: Drosophila melanogaster
• Sequence 2: XP_006513350.1
• Gene: Grin3b / 170483
• MGIID: 2150393
• Length: 1138
• Species: Mus musculus
• Alignment Length: 420
• Identity: 86/420 - (20%)
• Similarity: 143/420 - (34%)
• Gaps: 140/420 - (33%)

  Fly   288 GDGALGMLINRK-----ADICIGAMY------------SWYEDYT--YLDLSM-YLVRSGITCLV 332
            |||..|.|.:.:     .|:..|..:            |...|:|  :...|: .:||:..|.
Mouse   581 GDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRTRDTA-- 643

  Fly   333 PAPLRLTSWYLPLEPFKETLWAAILLCLCAEATGLVLAYKSEQALYVLP-GYREGWWTCTSFGVC 396
             :|:....|     |...::|..:...|...|..|.| |:......:.| |...|.....|..:.
Mouse   644 -SPIGAFMW-----PLHWSMWVGVFAALHLTALFLTL-YEWRSPYGLTPRGRNRGTVFSYSSALN 701

  Fly   397 TTFKLFISQSGNSKAYSL-TVRVL--LFACFLNDLIITSIYGGGLASILTIPSMDEAADTVTRLR 458
            ..:.:...::.:||.... |.|.|  |:|.|.  |::.|.|...||:::......|....:...:
Mouse   702 LCYAILFGRTVSSKTPKCPTGRFLMNLWAIFC--LLVLSSYTANLAAVMVGDKTFEELSGIHDPK 764

  Fly   459 FHR--------LQWAANSEAWVS----------------------AIRASD----EALVKD---I 486
            .|.        ..|.:::||::.                      |:..||    .|.:.|   :
Mouse   765 LHHPSQGFRFGTVWESSAEAYIKASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLL 829

  Fly   487 LYNFHIYSDDELLRLAQDQHMRIGFTVERLPFGHFAIGNY-LGPQAIDQLVIMKDDIYFQYTVAF 550
            .|...|.:|.:||.:.:.                |||..| :|
Mouse   830 DYEVSIDADCKLLTVGKP----------------FAIEGYGIG---------------------- 856

  Fly   551 VPRLWPLLDKLNTLIYSWHSSGF-----DKYWEY-----RVVADNLNLKIQQQVQETMTGTKDIG 605
            :|:..||...|:..|..:.||||     ||:::.     ||.|          |.||:
Mouse   857 LPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFA----------VTETL------- 904

  Fly   606 PVPLGMSNFAGFIIVWILGSAIATLTFLLE 635
              .:|:.:.:|..::..||...|.||.|.|
Mouse   905 --QMGVYHLSGLFVLLCLGLGSALLTSLGE 932

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir41a	NP_995744.4	None
Grin3b	XP_006513350.1	PBP1_iGluR_NMDA_NR3	141..481	CDD:380600
		PBP2_iGluR_NMDA_Nr3	494..888	CDD:270438	71/355 (20%)
		Lig_chan	656..922	CDD:365843	63/325 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167846612
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840