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Protein Alignment Ir41a and Grid2

DIOPT Version :9

Sequence 1:	NP_995744.4	Gene:	Ir41a / 2768714	FlyBaseID:	FBgn0040849	Length:	648	Species:	Drosophila melanogaster
Sequence 2:	NP_032193.1	Gene:	Grid2 / 14804	MGIID:	95813	Length:	1007	Species:	Mus musculus

Alignment Length:	508	Identity:	99/508 - (19%)
Similarity:	182/508 - (35%)	Gaps:	154/508 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   199 SLFADKL-NNLQGREVIIAGFDYPPYTVIKHNMSTNAQDMGVSGESDFKNVYIDGTETRIVLNFC 262
            ||...|| ||::|..:.:......|:.::..|:        :.....::...||..:.  :.|:.
Mouse   428 SLTDKKLENNMRGVVLRVVTVLEEPFVMVSENV--------LGKPKKYQGFSIDVLDA--LSNYL 482

  Fly   263 EQFNCTIQIDSSAANDWGKVYPNMSGDGALGMLINRKADICIGAMYSWYE-----DYT--YLDLS 320
             .||..|.:  :..:.:|....:.:.:|.:|.|:.::|||.|.|:....:     |:|  |:|.|
Mouse   483 -GFNYEIYV--APDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYS 544

  Fly   321 MYLVRSGITCLVPAPLRLTSWYLPLEPFKETLWAAILLCLCAEATGLVLAYKSEQALYVL----- 380
            :     |:  |:....:....:..|.||..:|||      |...|.|::..    .:|:|
Mouse   545 V-----GV--LLRRAEKTVDMFACLAPFDLSLWA------CIAGTVLLVGL----LVYLLNWLNP 592

  Fly   381 PGYREGWWTCTSF--GVCTTFKLFISQSGNSKAYSLTVRVLLFACFLNDLIITSIYGGGLASILT 443
            |..:.|..|.|:.  .:...:..|:.|.|.....:|..|:::.|.:|..||:.|.|...||:.||
Mouse   593 PRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLT 657

  Fly   444 IPSMDEAADTVTRLRFHRLQWAANSEAWVSAIRASDEALVKDILYNFHIYSDDELLRLAQDQHMR 508
            |..::.:..::                       .|.:...||.|.       .:|..|..||:|
Mouse   658 ITRIESSIQSL-----------------------QDLSKQTDIPYG-------TVLDSAVYQHVR 692

  Fly   509 I-GFT-------------------------------VERLPFGHFAIGNYLGPQAIDQLVIMKDD 541
            : |..                               ::::.:|::|   ::...|:.:.|.:.|.
Mouse   693 MKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYA---FVWDAAVLEYVAINDP 754

  Fly   542 IYFQYTVAFVPRLWPLLDKLNTLIYSWHSSGFDKYWEYRVVADNLNLKIQQQVQETMTGTKDI-- 604
            ....|||.            ||:....:.........||.|.....|::||      :|..||
Mouse   755 DCSFYTVG------------NTVADRGYGIALQHGSPYRDVFSQRILELQQ------SGDMDILK 801

  Fly   605 ----------------------GPVPLGMSNFAGFIIVWILGSAIATLTFLLE 635
                                  |  .|.:.:.||...:...|..::.|..:||
Mouse   802 HKWWPKNGQCDLYSSVDAKQKGG--ALDIKSLAGVFCILAAGIVLSCLIAVLE 852

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.