DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir41a and Gria4

DIOPT Version :10

Sequence 1:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_006509904.1 Gene:Gria4 / 14802 MGIID:95811 Length:912 Species:Mus musculus


Alignment Length:23 Identity:9/23 - (39%)
Similarity:13/23 - (56%) Gaps:2/23 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TTTRRTTPAQEYLP--PTTTRPT 29
            :::..:|||.|..|  ||.|..|
Mouse   440 SSSHTSTPASESSPQAPTVTFQT 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir41aNP_995744.4 None
Gria4XP_006509904.1 PBP1_iGluR_AMPA_GluR4 28..400 CDD:380611
PBP2_iGluR_AMPA_GluR4 414..795 CDD:270445 9/23 (39%)
Blue background indicates that the domain is not in the aligned region.

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