DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33346 and CG6839

DIOPT Version :10

Sequence 1:NP_996301.2 Gene:CG33346 / 2768690 FlyBaseID:FBgn0053346 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_649076.1 Gene:CG6839 / 40067 FlyBaseID:FBgn0036831 Length:430 Species:Drosophila melanogaster


Alignment Length:267 Identity:69/267 - (25%)
Similarity:116/267 - (43%) Gaps:31/267 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 VGFKY-GNTFMELYRSCYDARTMKAYFSINTV------YPTNLKSDRPPTV--FDKDGIITPADE 169
            |||:. .:.|.|..:.|::.......::.:.:      |.|.:......|.  ||...:.....:
  Fly   160 VGFEITSSRFAEQMQICFNEEEEVTRYTRHKLEPGSNYYETGVARITFQTAGFFDGKNVDKLYTQ 224

  Fly   170 ATFQMNSIYNRFEYLFGSGQTYVPSSRSLSFDRGHLTPVADYSFPKILRQTNKYLNVVPQYYNIN 234
            || |:.:|.|.   |.|..:.|..||.::...||||...||:.:....|.|..::|..||:...|
  Fly   225 AT-QLETINNE---LGGDAEKYFDSSSNVYLARGHLGAKADFDYAPEQRATFLFINAAPQWQTFN 285

  Fly   235 RSNWKIVEN----WVRGQKDVLNVCTGALGVLDLLNRSQKSVSIYLAPNKN-----PVPRWTYKI 290
            ..||..||:    ||...|..:|..||..||..|.|:......:|||.:.|     |||:..:::
  Fly   286 AGNWARVEDGLRAWVSKNKLNVNCYTGVYGVTTLPNKDGVETPLYLAKDDNNNGLIPVPKLYFRV 350

  Fly   291 I--RSLTTGIKYVILTSNNGWETQQPNPASVC-----KVTACPRTLNPTGTGYTFCCDPIDFIR- 347
            :  .|...||.:|.:.:.:..|.|......:|     :||...........|:::.|:..||:: 
  Fly   351 VIDPSSHRGIVFVGVNNPHLTEEQIKRDYVICDDVSDQVTYINWKTTDIKAGWSYACEVADFLKT 415

  Fly   348 -RNVPNL 353
             :::|.|
  Fly   416 VKHLPAL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33346NP_996301.2 Endonuclease_NS 124..344 CDD:214889 61/243 (25%)
CG6839NP_649076.1 NUC 170..420 CDD:238043 63/253 (25%)

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