DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33346 and pnu1

DIOPT Version :10

Sequence 1:NP_996301.2 Gene:CG33346 / 2768690 FlyBaseID:FBgn0053346 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_594598.2 Gene:pnu1 / 2542291 PomBaseID:SPAC17C9.08 Length:322 Species:Schizosaccharomyces pombe


Alignment Length:208 Identity:52/208 - (25%)
Similarity:81/208 - (38%) Gaps:51/208 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 YRSCYDARTMKAYFSINTVYPTNL---KSDRPPTVFDKDGIITPADEATFQMNSIYNRFEYLFGS 187
            |.|.:|.||...:::..|:...:|   |.:|..:.|..|             ::|...|:...| 
pombe    81 YMSVFDRRTRNPFYTAETITQESLNQRKGNRRYSEFVPD-------------DNIPEMFQAKLG- 131

  Fly   188 GQTYVPSSRSLSFDRGHLTPVADYSFPKILRQTNKYL-NVVPQYYN-INRSNWKIVENWVR---G 247
                  ..|...:||||..|.||..|.:.......|| |:.||..: .||:.|...|:|.|   .
pombe   132 ------DYRGSGYDRGHQVPAADCKFSQEAMNETFYLSNMCPQVGDGFNRNYWAYFEDWCRRLTS 190

  Fly   248 QKDVLNVCTGALGVLDLLNRSQKSVSIYLAPNKNPVPRW--TYKIIR-----SLTTGIKYVILTS 305
            :...:.:.||.|               || |.||...:|  .|::|.     ::.|....||:..
pombe   191 KYGSVTIMTGPL---------------YL-PKKNERGQWEVQYRVIGNPPNVAVPTHFFKVIIAE 239

  Fly   306 NNGWETQQPNPAS 318
            .:|..|..|:.|:
pombe   240 KSGEPTSSPSVAA 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33346NP_996301.2 Endonuclease_NS 124..344 CDD:214889 52/208 (25%)
pnu1NP_594598.2 NUC 78..289 CDD:214683 52/208 (25%)

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