DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and gpr39

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_956711.1 Gene:gpr39 / 791773 ZFINID:ZDB-GENE-040426-1395 Length:440 Species:Danio rerio


Alignment Length:406 Identity:106/406 - (26%)
Similarity:174/406 - (42%) Gaps:88/406 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 LWILFTVI----VLGNSAVLFV-MFINKN---RKSRMNYFIKQLALADLCVGLLNV---LTDIIW 183
            |.:|:.:|    ||||||.:.| ..:.:|   ::|...:.: .||.:||.|.|:.:   |...||
Zfish    23 LTVLYCLILSLGVLGNSATIHVAQVLQRNGYLQRSVAEHMV-SLACSDLLVLLIGLPVELYSAIW 86

  Fly   184 RITISWRAGNLACKAIRFSQVCVTYSSTYVLVAMSIDRYDAITHPMNF-SKSWKRARHLVAGAWL 247
            ...:| |:|:.||:...|.....:|::...:..:|::||.||.||..: :....|.|.|:..|||
Zfish    87 FPFLS-RSGDAACRIYNFLFELCSYATILNVATLSLERYLAICHPFRYRALRGGRTRRLLLAAWL 150

  Fly   248 ISALFSLPILVLY---------EEKLIQGHPQC------WIELGSPI--AWQVYMSLVSATLFAI 295
            .|||.:||:||..         .:..:|....|      |:...:.|  |:.:|:.:::...|..
Zfish   151 CSALVALPLLVATGTEGYVPAGRQTPVQNLTFCTSLSQHWVMYRTSIFTAFVLYLLVLAGVAFMC 215

  Fly   296 PALIISACYAIIVKTIWAKGSIFVPTERAGFGAAPA------RRASSRGIIPRAKVKTVKMTLTI 354
            .|:|:                    ..||..|.|.|      :..|:||  ..::.:|:...:.|
Zfish   216 RAMIL--------------------VLRAPMGPAEAGASGDHKHQSARG--KASRKQTILFLVLI 258

  Fly   355 VFVFIICWSPYIIFDLLQVFGQIPHSQ-TNIAIATFIQ------SLAPLNSAANPLIYCLFSSQV 412
            |....:||.|..|..|:.  ..:|.|. |...:.::|:      |...|:|..||::|.| ||:.
Zfish   259 VCALFVCWMPNQIRRLMT--AAVPKSSWTGSYLTSYIKLHPVADSFFYLSSVLNPMLYNL-SSRQ 320

  Fly   413 FRTLSRFPPFKWFTCCCKSYRNNSQQNRCHTVGRRLHNSCDSMRTLTTSLTVSRRSTNKTNARVV 477
            ||:     .|.....|..|.:        |...|.|.||..|..:..|...:.:||.|:  .|:.
Zfish   321 FRS-----AFLQTLLCRLSLQ--------HANRRTLENSGASKSSNNTLRPLLQRSLNR--IRMA 370

  Fly   478 ICERPTKVVTVPAMSE 493
            ...|.|.    |:.:|
Zfish   371 TSSRSTP----PSSAE 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 88/327 (27%)
TM helix 1 126..150 CDD:320325 10/24 (42%)
TM helix 2 159..182 CDD:320325 7/25 (28%)
TM helix 3 197..219 CDD:320325 2/21 (10%)
TM helix 4 240..256 CDD:320325 8/15 (53%)
TM helix 5 282..305 CDD:320325 4/22 (18%)
TM helix 6 348..370 CDD:320325 6/21 (29%)
TM helix 7 384..409 CDD:320325 8/30 (27%)
gpr39NP_956711.1 7tm_1 37..314 CDD:278431 77/302 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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