DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and ptgfr

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001172000.1 Gene:ptgfr / 571808 ZFINID:ZDB-GENE-120919-6 Length:390 Species:Danio rerio


Alignment Length:317 Identity:67/317 - (21%)
Similarity:122/317 - (38%) Gaps:37/317 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 ILFTVIVLGNSAVLFVMFINKNR---KSRMNY--FIKQLALADLCVGLLN-VLTDIIWRITISWR 190
            |..||.::.|:..||::....:|   ||:..:  |...|.:.|....|:| .|...::.....|.
Zfish    32 ISMTVGIVSNTLALFILIKAYHRFRYKSKAAFLLFASGLVITDFLGHLINGSLALYVYVSQKEWE 96

  Fly   191 AGNLACKAIRFSQVCVTYSSTYVLV---AMSIDRYDAITHPMNFSKSWKRARH---LVAGAWLIS 249
            ..:.......|..||:.:.....|:   .|:::|...:|.|: |..:...:.|   |:...||:.
Zfish    97 TFDNHKSLCDFFGVCMAFFGLTPLLLGCLMAVERCIGVTRPL-FHTTALGSHHVKRLLGVTWLLG 160

  Fly   250 ALFS-LPILVLYEEKLIQGHPQCWIELGSPIAWQVYMSLVSATLFAIPALIIS-ACYAIIVKTIW 312
            .|.: ||:|.....::.:....|:..|..|..|...:..:..:...:.||::| .|..:...|:.
Zfish   161 LLVALLPVLFQRSYQVQRSRSWCFFRLQGPRDWMDTLLPILFSALGLLALLVSLLCNTMTFLTLL 225

  Fly   313 AKGSIFVPTERAGFGAAPARRASSRGIIPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVFGQI 377
            ...   |..:|...  ..:|:||...       :.|...|.|:.|..:||.|.:|..::......
Zfish   226 RSR---VQLDRNNH--RHSRKASHHS-------EMVCQLLAIMLVSCVCWGPILITAIIFSLQDR 278

  Fly   378 PHSQTNIAIATFIQSLAPLNSAANPLIYCLFSSQVFRTLSRFP----------PFKW 424
            ...||:......:..:|..|...:|.:|.|....|.|.|.:..          .|:|
Zfish   279 GEDQTSYTHMLLVVRMATWNQILDPWVYILLRKAVLRRLFKVALRLCSRHLKFTFQW 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 64/297 (22%)
TM helix 1 126..150 CDD:320325 6/17 (35%)
TM helix 2 159..182 CDD:320325 6/25 (24%)
TM helix 3 197..219 CDD:320325 5/24 (21%)
TM helix 4 240..256 CDD:320325 6/19 (32%)
TM helix 5 282..305 CDD:320325 4/23 (17%)
TM helix 6 348..370 CDD:320325 8/21 (38%)
TM helix 7 384..409 CDD:320325 5/24 (21%)
ptgfrNP_001172000.1 7tm_1 41..306 CDD:278431 57/277 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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