DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCAP-R and avpr1aa

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001288043.1 Gene:avpr1aa / 571591 ZFINID:ZDB-GENE-101028-2 Length:379 Species:Danio rerio


Alignment Length:378 Identity:122/378 - (32%)
Similarity:187/378 - (49%) Gaps:32/378 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LETGGNSTSSDPGEFDNLNSFYFYETEQFAVLWILFTVIVLGNSAVLFVMFINKNRKSRMNYFIK 163
            :||..| ||..|...|...........:.|||.:.|.|.|:||.:||..:...|.:.|||:.|||
Zfish     1 METHSN-TSHPPNTSDPFGRDEEVAKIEIAVLSVTFAVAVIGNYSVLVAIHNTKKKTSRMHLFIK 64

  Fly   164 QLALADLCVGLLNVLTDIIWRITISWRAGNLACKAIRFSQVCVTYSSTYVLVAMSIDRYDAITHP 228
            .|:||||.|....||..:.|.||..:...:..|:.::..||...::|||::|.|::|||.||.||
Zfish    65 HLSLADLVVAFFQVLPQLCWEITFRFYGPDFLCRIVKHLQVMGMFASTYMMVMMTLDRYIAICHP 129

  Fly   229 M-NFSKSWKRARHLVAGAWLISALFSLPILVLYEEKLIQGHPQ---CWIELGSPIAWQVYMSLVS 289
            : ...:|.:|::.::.|.|:.|.:.|.|...::....||...:   ||.....|...:.|::.::
Zfish   130 LKTLQQSTRRSQVMIGGTWVCSLVLSSPQYFIFSLSEIQNGSEVFDCWAHFIQPWGVRAYITWIT 194

  Fly   290 ATLFAIPALIISACYAIIVKTIWAKGSIFVPTERAG-FGAAPARRASSRGIIPRAKVKTVKMTLT 353
            |.:|.:|.||:..||..|..:|  :.||...::|.. ||.......||   |.|||::|||||..
Zfish   195 AGIFLVPVLILMTCYGFICHSI--RMSIRYKSKRTQVFGKQSVSSVSS---ISRAKLRTVKMTFV 254

  Fly   354 IVFVFIICWSPYIIFDLLQVFGQIPH--SQTNIAIATFIQSLAPLNSAANPLIYCLFSSQVFRTL 416
            ||..::|||:|:....:..|:.|..:  ...|.|: |....||.|||..||.||.:||..:.:..
Zfish   255 IVLAYVICWAPFFTVQMWSVWDQSFNWDDSKNTAV-TLSALLASLNSCCNPWIYMVFSGHLLQDF 318

  Fly   417 SR-FPPFKWFTCCCKSYRNNSQQNRCHTVGRRLHNSCDSMRTLTTSLTVSRRS 468
            :. ||       ||:..|.:.          |..:|..|:|..|....::.||
Zfish   319 ALCFP-------CCQKIRKSF----------RKEDSDSSIRRTTLLTRMANRS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 103/298 (35%)
TM helix 1 126..150 CDD:320325 10/23 (43%)
TM helix 2 159..182 CDD:320325 11/22 (50%)
TM helix 3 197..219 CDD:320325 7/21 (33%)
TM helix 4 240..256 CDD:320325 4/15 (27%)
TM helix 5 282..305 CDD:320325 7/22 (32%)
TM helix 6 348..370 CDD:320325 10/21 (48%)
TM helix 7 384..409 CDD:320325 11/24 (46%)
avpr1aaNP_001288043.1 7tm_1 41..307 CDD:278431 93/271 (34%)
7tm_4 <116..>261 CDD:304433 49/149 (33%)
DUF1856 332..375 CDD:286120 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 163 1.000 Domainoid score I3913
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I4004
OMA 1 1.010 - - QHG45270
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24293
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.