DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and ptger2b

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001025421.1 Gene:ptger2b / 570410 ZFINID:ZDB-GENE-040724-267 Length:341 Species:Danio rerio


Alignment Length:351 Identity:79/351 - (22%)
Similarity:148/351 - (42%) Gaps:71/351 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 LFTVIVLGNSAVLFVMFINKNRK--SRMNYFIKQLALADLCVGLLN----VLTDIIWRIT-ISWR 190
            :|:..||||...|.::.:.:.::  |..:..:..|.:.|| :|..:    |||......: :...
Zfish    25 MFSTGVLGNVVALILLEMRRRKQPASLFHVLVSSLVITDL-LGTFSLSPLVLTAYFRNASLLGMN 88

  Fly   191 AGNLACKAIRFSQVCVTYSSTYVLVAMSIDRYDAITHPMNFSK-SWKRARHL-VAGAWLISALFS 253
            ...|||....::....:..:..:|::|:::|:.:|.||..:.| |.||..:: :|..:|:.|||.
Zfish    89 ENRLACGHFAYAMTFFSVVTLAILLSMAVERWLSIGHPFFYEKYSSKRCGYITIALIYLLCALFC 153

  Fly   254 L-PILVLYEEKLIQGHP--QCWIELGSPIAWQVYMSLVSATLFAIPALIISACYAI-IVKTIWAK 314
            : |.|..  .|.:|..|  .|:|::..           ||:......:|.::|..: ||.|:...
Zfish   154 VTPFLGF--GKYVQYCPGTWCFIDMDP-----------SASEHKAFNIIYASCLLLMIVCTVLCN 205

  Fly   315 GSIFVPTERAGFGAAPARRASSRGIIPRAKVKTVKMT-----------LTIVFVFIICWSPYIIF 368
            .|:.....|. :....|.|:|.|.  .|...:...||           :||.|||  |..|.:| 
Zfish   206 ASVIYHISRM-YRRLKAHRSSVRR--QRGHKRHRSMTKEVEHLVLLWFMTIAFVF--CSLPLVI- 264

  Fly   369 DLLQVFGQIPHS--------QTNIAIATFIQSLAPLNSAANPLIYCLFSSQVFRTLSRFPPFKWF 425
                   |:.|:        :.|:....|:.:    |...:|.::.:.|..|.|.|       | 
Zfish   265 -------QVYHNTLYHRDRHRNNVIPLLFLSA----NPIIDPWVFIILSPPVPRLL-------W- 310

  Fly   426 TCCCKSYRNNSQQNRCHTVGRRLHNS 451
            ...||:.::...:.:.|::...|::|
Zfish   311 DKICKAAKSKPIREKVHSIHPVLYHS 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 72/314 (23%)
TM helix 1 126..150 CDD:320325 6/16 (38%)
TM helix 2 159..182 CDD:320325 7/26 (27%)
TM helix 3 197..219 CDD:320325 2/21 (10%)
TM helix 4 240..256 CDD:320325 5/17 (29%)
TM helix 5 282..305 CDD:320325 4/22 (18%)
TM helix 6 348..370 CDD:320325 10/32 (31%)
TM helix 7 384..409 CDD:320325 3/24 (13%)
ptger2bNP_001025421.1 7tm_4 26..>238 CDD:304433 53/228 (23%)
7tm_1 32..297 CDD:278431 66/295 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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