DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and ptger4a

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001034718.1 Gene:ptger4a / 562469 ZFINID:ZDB-GENE-060222-1 Length:403 Species:Danio rerio


Alignment Length:382 Identity:82/382 - (21%)
Similarity:146/382 - (38%) Gaps:51/382 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 ILFTVIVLGNSAVLFVMFINKNRKSRMNYF--IKQLALADLCVGLLNVLTDIIWRITISWRAGNL 194
            |:|...|:.|...:.|:..::..:....::  :..||:.||...:|.....|...:..:|..|:.
Zfish    11 IMFIFGVISNLIAIVVLCKSRREQKETTFYTLVCGLAVTDLLGTVLASPVTIATYVKGAWPDGDP 75

  Fly   195 ACKAIRFSQVCVTYSSTYVLVAMSIDRYDAITHPMNFSKSWKRARHLVAGAWLI-----SALF-S 253
            .|:...|..:..:.:...::.||||:||.||.|.. |...:...|  :||..|:     :.|| :
Zfish    76 LCQYFGFVLLFFSLAGLSIICAMSIERYIAINHAY-FYNDYVDKR--LAGVTLLAIYASNILFCA 137

  Fly   254 LPILVLYEEKLIQGHPQCWIELGSPIAWQVYMSLVSATLFAIPALIISACYAIIVKTIWAKGSIF 318
            ||.:...|.|:......|:|:..:.::.....|.:.|...::..|:...|..::...:......|
Zfish   138 LPSVGFGEVKMQYPQTWCFIDWRTNVSAHAAFSYMYAGCSSLLILVTVVCNVLVCGALIRMHRRF 202

  Fly   319 VPTERAGFGAAPAR-----RASSRGIIPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVF---- 374
            |  .|...|..|.|     |:.|...:..|:::.|.:.:....|.:||..|.::    |||    
Zfish   203 V--RRTSLGTDPQRAADPGRSRSFSRLAGAEIQMVILLIATSAVVLICSIPLVV----QVFLNQL 261

  Fly   375 ------GQIPHSQTNIAIATFIQSLAPLNSAANPLIYCLFSSQVFRTLSRFPPFKWFTCCCKSYR 433
                  .::..:...:||     ..|..|...:|.||.|....|   ||:.........|....|
Zfish   262 YKTPVEKRLDKNPDLLAI-----RFASTNPILDPWIYILLRKAV---LSKVVENIKCLFCRSDSR 318

  Fly   434 NNSQQNRCHTVGRRLHNSCDS-----------MRTLTTSLTVSRRSTNKTNARVVIC 479
            ....||....:..:..:|.||           ..|..|||.:::......|:....|
Zfish   319 GQQTQNSLLCINGQQFSSRDSPSGVSRELQDVSSTSQTSLNLAKAPAGGQNSSSESC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 67/306 (22%)
TM helix 1 126..150 CDD:320325 5/17 (29%)
TM helix 2 159..182 CDD:320325 5/24 (21%)
TM helix 3 197..219 CDD:320325 3/21 (14%)
TM helix 4 240..256 CDD:320325 6/21 (29%)
TM helix 5 282..305 CDD:320325 4/22 (18%)
TM helix 6 348..370 CDD:320325 5/21 (24%)
TM helix 7 384..409 CDD:320325 8/24 (33%)
ptger4aNP_001034718.1 7tm_4 14..>200 CDD:304433 39/188 (21%)
7tm_1 20..293 CDD:278431 60/286 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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