DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCAP-R and Avpr1a

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_058543.2 Gene:Avpr1a / 54140 MGIID:1859216 Length:423 Species:Mus musculus


Alignment Length:430 Identity:126/430 - (29%)
Similarity:193/430 - (44%) Gaps:86/430 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SHDLETGGNST---------------------SSDPGEFDNLNSFYFYETEQFA-----VLWILF 134
            ||||..|.:|.                     .|.||:..|         |:.|     ||.::|
Mouse     7 SHDLPAGNSSPWWPLTTEGANSSREAAGLGEGGSPPGDVRN---------EELAKLEVTVLAVIF 62

  Fly   135 TVIVLGNSAVLFVMFINKNRKSRMNYFIKQLALADLCVGLLNVLTDIIWRITISWRAGNLACKAI 199
            .|.|||||:||..:.....:.|||:.||:.|:||||.|....||..:.|.||..:|..:..|:.:
Mouse    63 VVAVLGNSSVLLALHRTPRKTSRMHLFIRHLSLADLAVAFFQVLPQLCWDITYRFRGPDWLCRVV 127

  Fly   200 RFSQVCVTYSSTYVLVAMSIDRYDAITHPM-NFSKSWKRARHLVAGAWLISALFSLP---ILVLY 260
            :..||...::|:|:||.|:.|||.|:.||: ...:..:|:|.::|.:|.:|.:.|:|   |..:.
Mouse   128 KHLQVFAMFASSYMLVVMTADRYIAVCHPLKTLQQPARRSRLMIAASWGLSFVLSIPQYFIFSVI 192

  Fly   261 EEKLIQG--HPQCWIELGSPIAWQVYMSLVSATLFAIPALIISACYAIIVKTIW--AKGSIFVPT 321
            |.::..|  ...||.....|...:.|::.:::.:|.:|.:|:..||..|...||  .:|......
Mouse   193 EFEVNNGTKAQDCWATFIPPWGTRAYVTWMTSGVFVVPVIILGTCYGFICYHIWRNVRGKTASRQ 257

  Fly   322 ERAGFGAAPARRASSRGI-----------IPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVFG 375
            .:.|.|:..|.....:|:           |.|||::|||||..||..:|:||:|:.|..:..|: 
Mouse   258 SKGGKGSGEAAGPFHKGLLVTPCVSSVKSISRAKIRTVKMTFVIVSAYILCWTPFFIVQMWSVW- 321

  Fly   376 QIPHSQTNIA-------IATFIQSLAPLNSAANPLIYCLFSSQVFR-TLSRFPPFKWFTCCCKSY 432
                 .||..       ..|....||.|||..||.||..||..:.: .:..||       ||:|.
Mouse   322 -----DTNFVWTDSENPSTTITALLASLNSCCNPWIYMFFSGHLLQDCVQSFP-------CCQSI 374

  Fly   433 RNNSQQNRCHTVGRRLHNSCDSMRTLTTSLTVSRRSTNKT 472
            .....:           :..|||....||.:.:|..||.|
Mouse   375 AQKFAK-----------DDSDSMSRRQTSYSNNRSPTNST 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 102/323 (32%)
TM helix 1 126..150 CDD:320325 12/28 (43%)
TM helix 2 159..182 CDD:320325 10/22 (45%)
TM helix 3 197..219 CDD:320325 7/21 (33%)
TM helix 4 240..256 CDD:320325 5/18 (28%)
TM helix 5 282..305 CDD:320325 5/22 (23%)
TM helix 6 348..370 CDD:320325 11/21 (52%)
TM helix 7 384..409 CDD:320325 10/31 (32%)
Avpr1aNP_058543.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 6/15 (40%)
7tm_4 62..>259 CDD:304433 63/196 (32%)
7tm_1 68..353 CDD:278431 90/290 (31%)
DUF1856 377..423 CDD:286120 9/38 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..423 9/22 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45270
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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