DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and CG13995

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_608986.1 Gene:CG13995 / 33851 FlyBaseID:FBgn0031770 Length:545 Species:Drosophila melanogaster


Alignment Length:489 Identity:96/489 - (19%)
Similarity:163/489 - (33%) Gaps:178/489 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 GNSTSSDPGEFDNLNSFYFYETEQFAVLWILFTVI---------VLGNSAVLFVMFINKNRKSRM 158
            ||.:..:|.:.|:.:|        .:.|.:|...:         |:|||.::..:....:.:.| 
  Fly    49 GNFSLGNPYDVDSEHS--------ISPLTLLLLAVSYGLVVFGGVVGNSTLVLTLCSASSVRLR- 104

  Fly   159 NYFIKQLALADLCV-GLLNVLTDIIWRITISWRAGNL---ACKAIRFSQVCVTYSSTYVLVAMSI 219
            |..:..:.:|||.| |:...:|  :..:.::.|..:|   .||.|.:.||....:||.....:|:
  Fly   105 NPLLLAVCIADLLVTGISAPVT--LLNLAMNRRTRSLPLVLCKVIHYVQVMPVSASTISFFMLSL 167

  Fly   220 DRYDAITHPMNFSKSWKRARH--LVAGAWLISALFSLPILVLY----EEKLIQG--------HP- 269
            |||..:.||.......:|..|  |...:||.||..|.|.|..|    :..:::|        :| 
  Fly   168 DRYATVKHPRLAQLRQRRYLHVSLALLSWLASAAISTPFLFAYKIIAKSMVVKGGGAANTTPNPV 232

  Fly   270 --QCWIELGSPIAWQVYMSLVSATLFAIPAL---------------------------------- 298
              .|..:||:...:..::...:..:|.:|.:                                  
  Fly   233 SISCTSDLGANAMFMSFIIFHTIAVFVLPGIGVLLNHYGVRRKLCALSLTARAAHGELPLPIPIL 297

  Fly   299 -------IISAC-----------------------------YAIIVKTIWAKGSIFVPTER---- 323
                   |::.|                             .|:      :.|.|.:.|.:    
  Fly   298 RRQTHMVIVTGCPNAQQAACGGGTTADDTSNGNGTGTGGGPMAV------SPGDIQLHTLQPRQP 356

  Fly   324 --AGFGAAPARRASSRGIIPRA----------------------------KVKTVK-------MT 351
              ||....|....||..|.|||                            :..|::       |.
  Fly   357 GSAGSALEPGSYRSSNPISPRAMREIRAHSQRQRINRAGRGPATPGIPLPQTSTLRSRRHLANML 421

  Fly   352 LTIVFVFIICWSPYIIFDLLQVFGQIPH-SQTNIAIATFIQSLAPLNSAANPLIYCLFSSQVFRT 415
            :....:||.||:|::.....:.||.... |||::   .|...|....||.:|:||...:   ..:
  Fly   422 IASAVIFIACWAPHVFCIFYKNFGNNQQCSQTSV---YFSLLLGYFYSAISPVIYWALN---HNS 480

  Fly   416 LSRFPPFKWFTCCCKSYRNNSQQN------RCHT 443
            |.:.|       |....|..|.||      |.||
  Fly   481 LRQSP-------CAPIIRLRSMQNFLRSRFRTHT 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 81/433 (19%)
TM helix 1 126..150 CDD:320325 6/32 (19%)
TM helix 2 159..182 CDD:320325 7/23 (30%)
TM helix 3 197..219 CDD:320325 6/21 (29%)
TM helix 4 240..256 CDD:320325 7/17 (41%)
TM helix 5 282..305 CDD:320325 4/92 (4%)
TM helix 6 348..370 CDD:320325 6/28 (21%)
TM helix 7 384..409 CDD:320325 7/24 (29%)
CG13995NP_608986.1 7tm_1 88..>276 CDD:278431 43/190 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24224
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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