DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and Avpr1b

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_058901.3 Gene:Avpr1b / 29462 RGDID:61886 Length:421 Species:Rattus norvegicus


Alignment Length:425 Identity:136/425 - (32%)
Similarity:215/425 - (50%) Gaps:80/425 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 TAAPSHDLETGG-----NSTSSDPGEFDNLNSFYFYETEQFAVLWILFTVIVL---GNSAVLFVM 148
            ||.||    .||     |:|:...|..:.|..         ..:.||.||:||   ||.|||..:
  Rat     8 TATPS----PGGTLPVPNATTPWLGRDEELAK---------VEIGILATVLVLATGGNLAVLLTL 59

  Fly   149 FINKNRKSRMNYFIKQLALADLCVGLLNVLTDIIWRITISWRAGNLACKAIRFSQVCVTYSSTYV 213
            ..:.:::|||:.|:..|||.||.|.|..||..::|.||..::..:|.|:|:::.||...::|||:
  Rat    60 GRHGHKRSRMHLFVLHLALTDLGVALFQVLPQLLWDITYRFQGSDLLCRAVKYLQVLSMFASTYM 124

  Fly   214 LVAMSIDRYDAITHPMNFSKSWKRARH-LVAGAWLISALFSLPILVLYE-EKLIQGHP--QCWIE 274
            |:||::|||.|:.||:...:...::.: |:|..||::|:.|||.:.::. .::|||..  .||.:
  Rat   125 LLAMTLDRYLAVCHPLRSLRQPSQSTYPLIAAPWLLAAILSLPQVFIFSLREVIQGSGVLDCWAD 189

  Fly   275 LGSPIAW--QVYMSLVSATLFAIPALIISACYAIIVKTIWAKGSIFVPT-----ERAGF------ 326
            .  ..:|  :.|::..:..:|.:|..:::|||.:|...|:.  ::.|.|     ||.|:      
  Rat   190 F--YFSWGPRAYITWTTMAIFVLPVAVLTACYGLICHEIYK--NLKVKTQAGREERRGWRTWDKS 250

  Fly   327 -GAAPAR----RASSRGIIPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVFGQ-IPH-SQTNI 384
             .:|..|    |.||...|.|||::|||||..||..:|.||:|:....:..|:.: .|: ..||:
  Rat   251 SSSAATRGLPSRVSSISTISRAKIRTVKMTFVIVLAYIACWAPFFSVQMWSVWDENAPNEDSTNV 315

  Fly   385 AIATFIQSLAPLNSAANPLIYCLFSSQVF-RTLSRFPPFKWFTCCCKSYRNNSQQNRCHTVGRRL 448
            |. |....|..|:|..||.||..|:|::. |:||.      ..||..|      :.:.|      
  Rat   316 AF-TISMLLGNLSSCCNPWIYMGFNSRLLPRSLSH------HACCTGS------KPQVH------ 361

  Fly   449 HNSCDSMRTLTTSLTVSRRSTNKTNARVVICERPT 483
                   |.|:||...|||:|..|:|    |..||
  Rat   362 -------RQLSTSSLTSRRTTLLTHA----CGSPT 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 107/319 (34%)
TM helix 1 126..150 CDD:320325 11/26 (42%)
TM helix 2 159..182 CDD:320325 10/22 (45%)
TM helix 3 197..219 CDD:320325 9/21 (43%)
TM helix 4 240..256 CDD:320325 7/16 (44%)
TM helix 5 282..305 CDD:320325 5/22 (23%)
TM helix 6 348..370 CDD:320325 10/21 (48%)
TM helix 7 384..409 CDD:320325 9/24 (38%)
Avpr1bNP_058901.3 7tm_4 41..>184 CDD:304433 54/142 (38%)
7tm_1 51..335 CDD:278431 96/288 (33%)
7tm_4 <126..354 CDD:304433 74/238 (31%)
DUF1856 359..408 CDD:286120 14/44 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45270
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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