DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and Ptgfr

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_037247.1 Gene:Ptgfr / 25652 RGDID:3436 Length:366 Species:Rattus norvegicus


Alignment Length:325 Identity:71/325 - (21%)
Similarity:125/325 - (38%) Gaps:63/325 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 ILFTVIVLGNS---AVLFVMFINKNRKSRMNYFI--KQLALADLCVGLLN-------VLTDIIWR 184
            |..||.::.||   |:|...:....|||:.::.:  ..|.:.|....|:|       ..:|..| 
  Rat    35 IFMTVGIVSNSLAIAILMKAYQRFRRKSKASFLLLASGLVITDFFGHLINGGIAVFVYASDKDW- 98

  Fly   185 ITISWRAGNLACKAIRFSQVCVTYSSTYVLVAMSIDRYDAITHPMNFSK--SWKRARHLVAGAWL 247
              |.:...|:.|.....|.|.......::...|:|:|...:|:|:..|.  :.|..:.:::|..:
  Rat    99 --IRFDQSNILCSVFGISMVFSGLCPLFLGSTMAIERCIGVTNPLFHSTKITSKHVKMILSGVCM 161

  Fly   248 ISALFS-LPILVLYEEKLIQGHPQCWIELGSPIAWQVYMSLVSATLFAIPALIIS-ACYAIIVKT 310
            .:...: ||||...:.::......|:........|:....|:..:...:.||.|| :|.|:...|
  Rat   162 FAVFVALLPILGHRDYQIQASRTWCFYNTEHIEDWEDRFYLLFFSSLGLLALGISFSCNAVTGVT 226

  Fly   311 IWAKGSIFVPTERAGFGAAPARRASSRGIIPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVFG 375
            :.          |..|.:...|:..|.      .::.|...|.|:.|..:||||:::        
  Rat   227 LL----------RVKFRSQQHRQGRSH------HLEMVIQLLAIMCVSCVCWSPFLV-------- 267

  Fly   376 QIPHSQTNIAI-----------ATFIQSLAPLNSAANPLIYCLFSSQVFRTLSRFPPFKWFTCCC 429
                :..||||           ..|...:|..|...:|.:|.|....|.|.|     :|..:.||
  Rat   268 ----TMANIAINGNNSPVTCETTLFALRMATWNQILDPWVYILLRKAVLRNL-----YKLASRCC 323

  Fly   430  429
              Rat   324  323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 67/310 (22%)
TM helix 1 126..150 CDD:320325 7/20 (35%)
TM helix 2 159..182 CDD:320325 5/31 (16%)
TM helix 3 197..219 CDD:320325 3/21 (14%)
TM helix 4 240..256 CDD:320325 2/16 (13%)
TM helix 5 282..305 CDD:320325 6/23 (26%)
TM helix 6 348..370 CDD:320325 8/21 (38%)
TM helix 7 384..409 CDD:320325 9/35 (26%)
PtgfrNP_037247.1 7tmA_FP 27..316 CDD:320273 68/316 (22%)
TM helix 1 29..53 CDD:320273 7/17 (41%)
TM helix 2 67..89 CDD:320273 4/21 (19%)
TM helix 3 109..131 CDD:320273 3/21 (14%)
TM helix 4 154..170 CDD:320273 1/15 (7%)
TM helix 5 198..221 CDD:320273 6/22 (27%)
TM helix 6 248..270 CDD:320273 8/33 (24%)
TM helix 7 283..308 CDD:320273 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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