DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCAP-R and Ptger1

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:XP_006530834.1 Gene:Ptger1 / 19216 MGIID:97793 Length:439 Species:Mus musculus


Alignment Length:450 Identity:104/450 - (23%)
Similarity:166/450 - (36%) Gaps:113/450 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GAGGVAAGGESLTPTDV------AAVNLTYFTPAISHVMLA--PTTIATTTASATMVQIQTTAAP 95
            |:.|.|.|.|...||.:      ||:..|..:|...::.||  ..|.||.....|.|.       
Mouse     5 GSCGGALGTEGWDPTSLCPLLIYAALLATDMSPCGLNLSLADEAATCATPRLPNTSVV------- 62

  Fly    96 SHDLETGGNSTSSDP---------GEFDNLNSFYFYETEQFAVLWILFTVIVLGNSAVLFVMFIN 151
               |.||.|.||  |         |...|             ||.:.....|.|..         
Mouse    63 ---LPTGDNGTS--PALPIFSMTLGAVSN-------------VLALALLAQVAGRM--------- 100

  Fly   152 KNRKSRMNY--FIKQLALADLCVGLLNVLTDIIWRITISWRAGNLACKAIRFSQVCVTYSSTYVL 214
            :.|:|...:  |:..|...||...:  :...::.|:..:.||.  |..|..|...|:.:.....|
Mouse   101 RRRRSAATFLLFVASLLAIDLAGHV--IPGALVLRLYTAGRAP--AGGACHFLGGCMVFFGLCPL 161

  Fly   215 V---AMSIDRYDAITHPMNFSKSWKRARHLVAGAWLIS---ALFSLPILVLYEEKLIQGHPQCWI 273
            :   .|:::|...:|.|:..:.....||..:|.|.|.:   |:..||::.:...:|......|:|
Mouse   162 LLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFI 226

  Fly   274 ELGSPIAWQVYMSLVSATLFA-------IPALIISACYAI-IVKTIWAK----------GSIFVP 320
            .||....|:   ..:.|.|||       :.||:.:....: :::..|.:          |    |
Mouse   227 SLGPRGGWR---QALLAGLFAGLGLAALLAALVCNTLSGLALLRARWRRRRSRRFRKTAG----P 284

  Fly   321 TERAGFG----------------AAPARRASSRG-----IIPRAKVKTVKMTLTIVFVFIICWSP 364
            .:|..:|                :|.|...||||     .:....|:.|...:.|:.|..|||||
Mouse   285 DDRRRWGSRGPRLASASSASSITSATATLRSSRGGGSARRVHAHDVEMVGQLVGIMVVSCICWSP 349

  Fly   365 YIIFDLLQVFGQIPHS-QTNIAIATFIQSLAPLNSAANPLIYCLFSSQVFRTLSRFPPFK 423
            .::..:|.:.|...:| |..:.:|.   .||..|...:|.:|.|....:.|.|.|..|.:
Mouse   350 LLVLVVLAIGGWNSNSLQRPLFLAV---RLASWNQILDPWVYILLRQAMLRQLLRLLPLR 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 74/339 (22%)
TM helix 1 126..150 CDD:320325 4/23 (17%)
TM helix 2 159..182 CDD:320325 4/24 (17%)
TM helix 3 197..219 CDD:320325 5/24 (21%)
TM helix 4 240..256 CDD:320325 5/18 (28%)
TM helix 5 282..305 CDD:320325 6/29 (21%)
TM helix 6 348..370 CDD:320325 8/21 (38%)
TM helix 7 384..409 CDD:320325 7/24 (29%)
Ptger1XP_006530834.1 7tm_GPCRs 69..394 CDD:391938 78/362 (22%)
TM helix 1 70..96 CDD:341315 7/40 (18%)
TM helix 2 109..135 CDD:341315 5/27 (19%)
TM helix 3 146..176 CDD:341315 5/29 (17%)
TM helix 4 188..210 CDD:341315 8/21 (38%)
TM helix 5 235..264 CDD:341315 6/31 (19%)
TM helix 6 327..357 CDD:341315 9/29 (31%)
TM helix 7 367..392 CDD:341315 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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