DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and ZK863.1

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_506054.2 Gene:ZK863.1 / 191444 WormBaseID:WBGene00014122 Length:370 Species:Caenorhabditis elegans


Alignment Length:311 Identity:65/311 - (20%)
Similarity:105/311 - (33%) Gaps:101/311 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 FSKSWKRARHLVAGAWLISALFSLPILVLYEEKLIQGHP-------QCWIELGSPIAWQVYMSL- 287
            |.:.|..:..|:..:.:.....:||:||:. ..||:.|.       .|.|..|:.:......:| 
 Worm     9 FLREWAFSSRLLFYSIIAVTSITLPVLVII-MVLIRPHRNSQYFPYMCGIIAGNFVLLSTVFTLV 72

  Fly   288 ----VSATLFAIPALIISACYAIIVKTIWAKGSIFVPTERAGFGAA-------PARRASSRGIIP 341
                |:.....:|..:|....|.:|.:    .|.|:.....|..:.       |.|   ||..:|
 Worm    73 VSENVNFVYSYLPGFMICKFSAFLVNS----ASCFIHWTWVGMYSQRFLHVFFPLR---SRRRLP 130

  Fly   342 RAKVKTVKMTLTIVFVFIIC--WSPYIIFDLLQVFGQIPHSQTNIAIATFIQSLAPLNSAANPLI 404
            |:...|:   |.|:.:...|  |:|..|.:|                     |.:|.|::..  .
 Worm   131 RSTWNTL---LIILLISCTCQIWAPITITEL---------------------SFSPGNNSQG--T 169

  Fly   405 YC----LFSSQ------VFRTLSRFPPF---------------KWFT----CCCKSYRNNSQQNR 440
            ||    .|||.      |..|::.|.||               .|.|    ......|||     
 Worm   170 YCAEDPYFSSSSKIIVLVESTITFFIPFMLTVLADISVLVSKVPWQTPFKLISADDLRNN----- 229

  Fly   441 CHTVGRRLHNSCDSMRTLTTSLTVSRRSTNKTNA--RVVICERPTKVVTVP 489
                     |..|:|: :.:.|.:......:.||  |.:|....|.|:.:|
 Worm   230 ---------NRSDNMK-IVSKLNLESAEKRRINAIKRCLISATLTLVLNLP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 45/215 (21%)
TM helix 1 126..150 CDD:320325
TM helix 2 159..182 CDD:320325
TM helix 3 197..219 CDD:320325
TM helix 4 240..256 CDD:320325 2/15 (13%)
TM helix 5 282..305 CDD:320325 4/27 (15%)
TM helix 6 348..370 CDD:320325 6/23 (26%)
TM helix 7 384..409 CDD:320325 5/28 (18%)
ZK863.1NP_506054.2 7tm_GPCRs 36..289 CDD:391938 59/284 (21%)
TM helix 2 50..74 CDD:341315 4/23 (17%)
TM helix 3 90..120 CDD:341315 5/33 (15%)
TM helix 4 131..149 CDD:341315 5/20 (25%)
TM helix 5 182..206 CDD:341315 5/23 (22%)
TM helix 6 248..278 CDD:341315 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24224
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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