DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and srv-27

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_500959.2 Gene:srv-27 / 190647 WormBaseID:WBGene00005738 Length:335 Species:Caenorhabditis elegans


Alignment Length:412 Identity:74/412 - (17%)
Similarity:144/412 - (34%) Gaps:142/412 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SDPGEFDNLNSFYFYETEQFAVLWILFTVIVLGNSAVLFVMFINKNRKSRMNYFIKQLALADLCV 172
            ||..|..|.....||.. ....|.|.||:::    .::.:..::|..|:.....:.|..:||   
 Worm     2 SDSLESPNWGFRVFYGM-SIVTLPIYFTILI----CLIHLRCVSKTYKTTFYSLLLQHCIAD--- 58

  Fly   173 GLLNVLTDIIWRITISWRAGNLACKAIRFSQ-----------VCVTYSSTYV--------LVAMS 218
                 |..::..|.:|      ..:.|.|.:           ...||:..||        ::.:|
 Worm    59 -----LFSMLGYIALS------PAREIPFIRQFYFDYQEYYIAAATYNIIYVSLYIRCTGIILLS 112

  Fly   219 IDRYDAITHP-------MNFSKSWKRARHLVAGAWLISALFSLPIL--------------VLYEE 262
            :.||..||.|       :..:.:||    ::...|:...|.::.:|              ::.|:
 Worm   113 LQRYLVITSPHSKIAIKVQTAANWK----IILVYWIPPTLLNIVVLKDTNFHFDGLEDMAIVAEK 173

  Fly   263 KLIQGHPQCWIELGSPIAWQVYMSLVSATLFAIPALIISACYAIIVKTIWAKGSIFVPTERAGFG 327
            .:||.:                 :|::..:.:|..::.|..|          |::|         
 Worm   174 TVIQRN-----------------TLMALIVVSITCIVSSGAY----------GALF--------- 202

  Fly   328 AAPARRASSR-GIIPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVFGQIPHSQTNIAIATFIQ 391
             :..|:.||| ....|.:|......|.::|.|.:.   .:.:..|..|.:   :|.|..| .:::
 Worm   203 -SFVRKNSSRLSKSLRREVHLAFQVLVLLFAFFLI---LVFYTFLNYFSR---TQNNGPI-FYMR 259

  Fly   392 SLAPLN----SAANPLIYCLFSSQVFRTLSRFPPFKWFTCCCKSYRNN-----------SQQNRC 441
            .|.|:.    |..||......:.::.|.:     .|..:|     |.:           :..|:.
 Worm   260 GLYPMANGFLSYINPFCILFLNKELTRKM-----IKPISC-----RGDLMSEVQISGIATNSNKS 314

  Fly   442 HTV-----GRRLHNSCDSMRTL 458
            ||.     |    |:.::.||:
 Worm   315 HTAQAVTKG----NATENRRTI 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 58/336 (17%)
TM helix 1 126..150 CDD:320325 4/23 (17%)
TM helix 2 159..182 CDD:320325 4/22 (18%)
TM helix 3 197..219 CDD:320325 6/40 (15%)
TM helix 4 240..256 CDD:320325 2/15 (13%)
TM helix 5 282..305 CDD:320325 3/22 (14%)
TM helix 6 348..370 CDD:320325 3/21 (14%)
TM helix 7 384..409 CDD:320325 6/28 (21%)
srv-27NP_500959.2 7TM_GPCR_Srv 15..294 CDD:370977 61/350 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24224
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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