DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and C54E10.3

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_507676.1 Gene:C54E10.3 / 183793 WormBaseID:WBGene00008308 Length:318 Species:Caenorhabditis elegans


Alignment Length:241 Identity:63/241 - (26%)
Similarity:99/241 - (41%) Gaps:63/241 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EFDNLNSFYFYETEQFAVLWI-LFTVIVLGNSAVLFVMFINKNRKSRMN-----YFIKQLA---- 166
            |:.|.:...||     :||:: .||::      ::|:.|:..:.|:..|     :|...||    
 Worm    25 EWQNSSQILFY-----SVLFVGFFTLL------IIFLSFLYIHGKTGKNVHFLPFFSAILAGNFV 78

  Fly   167 -LADLCVGLLNVLTDIIWRITISWRAGNLACKAIRFSQVCVTYSSTYV---LVAMSIDRYDAITH 227
             |..|...::...:|:|:. ||   .|...||...||   |..||.::   .|||..||:..|..
 Worm    79 LLGTLVASVIVENSDVIYD-TI---PGVWVCKMTAFS---VNSSSCFIHWTWVAMYADRFCYIFF 136

  Fly   228 PMNFSKSWK-RARHLVAGAWLISALFSL--PILV-----------LY--EEKLIQGHPQCWIELG 276
            |..|.:..| |.:.::....|||..|.|  |||:           :|  |:...|.|        
 Worm   137 PFRFRRHSKFRTKCILCTILLISMCFQLWTPILITGRRLDSQFDNIYCAEDPRFQKH-------- 193

  Fly   277 SPIAWQVYMSLVSATLFAIPALIISACYAIIVKTIWAKGSIFVPTE 322
                :|:.|.|...|.|.:|..:  ..:|.|....| |..|.:.|:
 Worm   194 ----FQLIMVLEVITTFFLPLTL--TIFADISVLTW-KTKITMVTQ 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 59/229 (26%)
TM helix 1 126..150 CDD:320325 5/24 (21%)
TM helix 2 159..182 CDD:320325 7/32 (22%)
TM helix 3 197..219 CDD:320325 9/24 (38%)
TM helix 4 240..256 CDD:320325 5/17 (29%)
TM helix 5 282..305 CDD:320325 6/22 (27%)
TM helix 6 348..370 CDD:320325
TM helix 7 384..409 CDD:320325
C54E10.3NP_507676.1 7tm_GPCRs <99..>247 CDD:391938 43/155 (28%)
TM helix 3 105..135 CDD:341315 12/32 (38%)
TM helix 4 147..169 CDD:341315 7/21 (33%)
TM helix 5 194..217 CDD:341315 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24224
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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