DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and Avpr2

DIOPT Version :9

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_062277.1 Gene:Avpr2 / 12000 MGIID:88123 Length:371 Species:Mus musculus


Alignment Length:380 Identity:117/380 - (30%)
Similarity:181/380 - (47%) Gaps:32/380 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 MVQIQTTAAPSHDLETGGNSTSSDPGE-FDNLNSFYFYETEQFAVLWILFTVIVLGNSAVLFVMF 149
            |:.:.||:|....|.:..:.::|...| .|:.:....  ..:.|:|..:|..:.|.|..||..: 
Mouse     1 MILVSTTSAVPGALSSPSSPSNSSQEELLDDRDPLLV--RAELALLSTIFVAVALSNGLVLGAL- 62

  Fly   150 INKNRKSR---MNYFIKQLALADLCVGLLNVLTDIIWRITISWRAGNLACKAIRFSQVCVTYSST 211
            |.:.|:.|   |:.||..|.||||.|.|..||..:.|..|..:...:..|:|:::.|:...|:|:
Mouse    63 IRRGRRGRWAPMHVFISHLCLADLAVALFQVLPQLAWDATDRFHGPDALCRAVKYLQMVGMYASS 127

  Fly   212 YVLVAMSIDRYDAITHPM-----NFSKSWKRARHLVAGAWLISALFSLPILVLYEEKLI---QGH 268
            |:::||::||:.||..||     .....|.|.   |..||..|.|.|||.|.::.::.:   .|.
Mouse   128 YMILAMTLDRHRAICRPMLAYRHGGGARWNRP---VLVAWAFSLLLSLPQLFIFAQRDVGNGSGV 189

  Fly   269 PQCWIELGSPIAWQVYMSLVSATLFAIPALIISACYAIIVKTIWAKGSIFVPTERAGFGAAPARR 333
            ..||.....|...:.|::.::..:|..|||.|:||..:|.:.|.| ..:..|:||||......|.
Mouse   190 FDCWARFAEPWGLRAYVTWIALMVFVAPALGIAACQVLIFREIHA-SLVPGPSERAGRRRRGHRT 253

  Fly   334 AS-SRGI-IPRAKVKTVKMTLTIVFVFIICWSPYIIFDLLQVFGQIPHSQTNIAIATFIQSLAPL 396
            .| |.|. :..|..|||:|||.||.|:::||:|:.:..|...:.  |.:.........:..||.|
Mouse   254 GSPSEGAHVSAAMAKTVRMTLVIVIVYVLCWAPFFLVQLWAAWD--PEAPLERPPFVLLMLLASL 316

  Fly   397 NSAANPLIYCLFSSQVFRTLSRFPPFKWFTCCCKSYRNNS---QQNRCHTVGRRL 448
            ||..||.||..|||.|...|      :...||.:.:..:|   |...|.|....|
Mouse   317 NSCTNPWIYASFSSSVSSEL------RSLLCCAQRHTTHSLGPQDESCATASSSL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 101/304 (33%)
TM helix 1 126..150 CDD:320325 7/23 (30%)
TM helix 2 159..182 CDD:320325 11/22 (50%)
TM helix 3 197..219 CDD:320325 7/21 (33%)
TM helix 4 240..256 CDD:320325 7/15 (47%)
TM helix 5 282..305 CDD:320325 8/22 (36%)
TM helix 6 348..370 CDD:320325 10/21 (48%)
TM helix 7 384..409 CDD:320325 9/24 (38%)
Avpr2NP_062277.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 6/25 (24%)
7tmA_V2R 38..326 CDD:320510 96/294 (33%)
TM helix 1 39..65 CDD:320510 8/26 (31%)
TM helix 2 74..101 CDD:320510 13/26 (50%)
TM helix 3 112..142 CDD:320510 11/29 (38%)
TM helix 4 155..176 CDD:320510 10/23 (43%)
TM helix 5 202..231 CDD:320510 9/28 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..259 8/18 (44%)
TM helix 6 264..294 CDD:320510 14/29 (48%)
TM helix 7 304..326 CDD:320510 8/21 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..371 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6043
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3458
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.980

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