DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCAP-R and oxtra

DIOPT Version :10

Sequence 1:NP_001368957.1 Gene:CCAP-R / 2768688 FlyBaseID:FBgn0039396 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001186299.1 Gene:oxtra / 100001530 ZFINID:ZDB-GENE-110805-2 Length:388 Species:Danio rerio


Alignment Length:388 Identity:121/388 - (31%)
Similarity:188/388 - (48%) Gaps:30/388 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ETGGNSTSSDPGEFDNLNSFYFYETEQFA-----VLWILFTVIVLGNSAVLFVMFINKNRKSRMN 159
            |:..|:|:...|....:|.  ....|:.|     ||.::..:.:.||..||..:...|:.:|||.
Zfish    15 ESSRNATNETYGVNQTVNP--LKRNEEVAKVEVTVLALVLFLALAGNLCVLIAIHTAKHSQSRMY 77

  Fly   160 YFIKQLALADLCVGLLNVLTDIIWRITISWRAGNLACKAIRFSQVCVTYSSTYVLVAMSIDRYDA 224
            ||:|.|::|||.|.:..||..:||.||..:...::.|:.:::.|....::|||:||.|||||..|
Zfish    78 YFMKHLSIADLVVAVFQVLPQLIWDITFRFYGPDILCRLVKYLQTVGMFASTYMLVLMSIDRCMA 142

  Fly   225 ITHPMNFSKSWKRARHLVAGAWLISALFSLPILVLYEEKLI-QGHPQCWIELGSPIAWQVYMSLV 288
            |..|:. |...::.|..|..:|.:|.|||:|.:.::..:.: .|...||.:...|...:.|::.:
Zfish   143 ICQPLR-SLHKRKDRCYVICSWALSLLFSIPQVYIFSLREVGSGVYDCWGDFVQPWGAKAYITWI 206

  Fly   289 SATLFAIPALIISACYAIIVKTIW-------AKGSIFVPTERAGFGAAPARRASSRGIIPRAKVK 346
            |.|::.||..|:|.||.:|...||       .:......|.:|..|.|.| |.||..:|.:||:.
Zfish   207 SLTIYIIPVTILSVCYGLISFKIWQNFKRKTKRDQCITLTPKASKGNALA-RVSSVKLISKAKIT 270

  Fly   347 TVKMTLTIVFVFIICWSPYIIFDLLQVFG-QIPHSQTNIAIATFIQSLAPLNSAANPLIYCLFSS 410
            |||||..||..:|:||:|:....:...:. :.|.......|:..   ||.|||..||.||..|:.
Zfish   271 TVKMTFVIVLAYIVCWTPFFSVQMWSAWDPEAPREAMPFIISML---LASLNSCCNPWIYMFFAG 332

  Fly   411 QVFRTLSRFPPFKWFTCCCKSYRNNSQQNRCHTVGRRLHNSCDSMRTLTTSLTVSRRSTNKTN 473
            .:|..|.:.     ..||...|..:||.........|..||    .|.....|.|:||..:|:
Zfish   333 HLFHDLKQN-----LFCCSTLYLKSSQCRYDPEQDSRKSNS----STYVIKSTSSQRSITQTS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCAP-RNP_001368957.1 7tmA_NPSR 124..416 CDD:320325 101/305 (33%)
TM helix 1 125..151 CDD:320325 8/30 (27%)
TM helix 2 158..185 CDD:320325 13/26 (50%)
TM helix 3 196..226 CDD:320325 13/29 (45%)
TM helix 4 237..258 CDD:320325 8/20 (40%)
TM helix 5 281..310 CDD:320325 10/28 (36%)
TM helix 6 342..372 CDD:320325 13/29 (45%)
TM helix 7 384..409 CDD:320325 10/24 (42%)
oxtraNP_001186299.1 7tmA_OT_R 42..338 CDD:320509 99/300 (33%)
TM helix 1 43..69 CDD:320509 6/25 (24%)
TM helix 2 76..103 CDD:320509 13/26 (50%)
TM helix 3 114..144 CDD:320509 13/29 (45%)
TM helix 4 154..175 CDD:320509 8/20 (40%)
TM helix 5 199..228 CDD:320509 10/28 (36%)
TM helix 6 266..296 CDD:320509 13/29 (45%)
TM helix 7 306..331 CDD:320509 10/27 (37%)

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