Sequence 1: | NP_001097934.2 | Gene: | LpR1 / 2768687 | FlyBaseID: | FBgn0066101 | Length: | 1076 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112612.2 | Gene: | Lrp4 / 83469 | RGDID: | 619731 | Length: | 1905 | Species: | Rattus norvegicus |
Alignment Length: | 786 | Identity: | 331/786 - (42%) |
---|---|---|---|
Similarity: | 423/786 - (53%) | Gaps: | 89/786 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 127 GIGQSLEAKCDEKQFQCHSG-----DCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRC 186
Fly 187 GNGNCIPNKWRCDQESDCADGSDEANELC-MNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSD 250
Fly 251 EAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNC-----NQTCRADEFTCGNGR 310
Fly 311 CIQKRWKCDHDDDCGDGSDEKECPV-VPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDERSCA 374
Fly 375 NVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNV---TCRADQFQCGDRS 436
Fly 437 CIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPDG 501
Fly 502 EDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGKCSQICV 566
Fly 567 NEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVNSTKAATALD 631
Fly 632 FVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELT 696
Fly 697 NFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGI 761
Fly 762 TLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKA 826
Fly 827 NKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCA 891
Fly 892 CPTGLK 897 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LpR1 | NP_001097934.2 | LDLa | 135..167 | CDD:197566 | 15/36 (42%) |
LDLa | 178..210 | CDD:197566 | 16/31 (52%) | ||
LDLa | 219..254 | CDD:238060 | 18/34 (53%) | ||
LDLa | 259..295 | CDD:238060 | 16/35 (46%) | ||
LDLa | 343..373 | CDD:238060 | 16/29 (55%) | ||
LDLa | 383..415 | CDD:197566 | 11/31 (35%) | ||
Ldl_recept_a | 423..459 | CDD:278486 | 16/38 (42%) | ||
LDLa | 476..504 | CDD:197566 | 2/27 (7%) | ||
FXa_inhibition | 514..549 | CDD:291342 | 13/34 (38%) | ||
EGF_CA | 551..581 | CDD:214542 | 17/29 (59%) | ||
LY | 662..702 | CDD:214531 | 16/39 (41%) | ||
LY | 704..747 | CDD:214531 | 26/42 (62%) | ||
LY | 749..790 | CDD:214531 | 20/40 (50%) | ||
FXa_inhibition | 864..905 | CDD:291342 | 15/34 (44%) | ||
Lrp4 | NP_112612.2 | LDLa | 27..66 | CDD:238060 | 17/40 (43%) |
Ldl_recept_a | 70..105 | CDD:278486 | 18/36 (50%) | ||
LDLa | 110..142 | CDD:238060 | 18/33 (55%) | ||
LDLa | 148..182 | CDD:238060 | 16/35 (46%) | ||
LDLa | 231..265 | CDD:238060 | 18/34 (53%) | ||
LDLa | 270..304 | CDD:238060 | 13/36 (36%) | ||
LDLa | 311..343 | CDD:197566 | 14/31 (45%) | ||
FXa_inhibition | 358..393 | CDD:291342 | 15/39 (38%) | ||
EGF_CA | 395..434 | CDD:214542 | 19/39 (49%) | ||
NHL | <471..622 | CDD:302697 | 70/151 (46%) | ||
NHL repeat | 471..507 | CDD:271320 | 15/35 (43%) | ||
LDL-receptor class B 1 | 480..522 | 18/42 (43%) | |||
LY | 505..545 | CDD:214531 | 16/40 (40%) | ||
NHL repeat | 510..550 | CDD:271320 | 16/39 (41%) | ||
LDL-receptor class B 2 | 523..565 | 18/41 (44%) | |||
NHL repeat | 555..589 | CDD:271320 | 21/33 (64%) | ||
LDL-receptor class B 3 | 566..609 | 22/42 (52%) | |||
LY | 590..632 | CDD:214531 | 20/41 (49%) | ||
NHL repeat | 598..622 | CDD:271320 | 12/23 (52%) | ||
LDL-receptor class B 4 | 610..652 | 24/43 (56%) | |||
LY | 633..673 | CDD:214531 | 22/41 (54%) | ||
LDL-receptor class B 5 | 653..693 | 17/41 (41%) | |||
FXa_inhibition | 702..>729 | CDD:291342 | 15/32 (47%) | ||
LY | 766..806 | CDD:214531 | |||
LDL-receptor class B 6 | 785..827 | ||||
LY | 808..850 | CDD:214531 | |||
LDL-receptor class B 7 | 828..870 | ||||
LDL-receptor class B 8 | 871..914 | ||||
Ldl_recept_b | 871..911 | CDD:278487 | |||
LY | 895..937 | CDD:214531 | |||
LDL-receptor class B 9 | 915..956 | ||||
LY | 938..979 | CDD:214531 | |||
LDL-receptor class B 10 | 957..998 | ||||
FXa_inhibition | 1006..1043 | CDD:291342 | |||
NHL | <1085..1277 | CDD:302697 | |||
NHL repeat | 1085..1123 | CDD:271320 | |||
LDL-receptor class B 11 | 1093..1135 | ||||
NHL repeat | 1128..1161 | CDD:271320 | |||
LDL-receptor class B 12 | 1136..1178 | ||||
NHL repeat | 1166..1203 | CDD:271320 | |||
LDL-receptor class B 13 | 1179..1222 | ||||
NHL repeat | 1212..1244 | CDD:271320 | |||
LDL-receptor class B 14 | 1223..1263 | ||||
NHL repeat | 1253..1277 | CDD:271320 | |||
LDL-receptor class B 15 | 1264..1306 | ||||
FXa_inhibition | 1313..1348 | CDD:291342 | |||
LY | 1379..1418 | CDD:214531 | |||
LDL-receptor class B 16 | 1397..1439 | ||||
LY | 1420..1460 | CDD:214531 | |||
LDL-receptor class B 17 | 1440..1482 | ||||
LDL-receptor class B 18 | 1483..1526 | ||||
Ldl_recept_b | 1483..1523 | CDD:278487 | |||
LY | 1507..1547 | CDD:214531 | |||
LDL-receptor class B 19 | 1527..1568 | ||||
LY | 1549..1589 | CDD:214531 | |||
LDL-receptor class B 20 | 1569..1610 | ||||
FXa_inhibition | 1617..>1641 | CDD:291342 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1659..1696 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1853..1905 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |