DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and si:dkey-258f14.3

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:XP_021334056.1 Gene:si:dkey-258f14.3 / 571152 ZFINID:ZDB-GENE-050809-43 Length:526 Species:Danio rerio


Alignment Length:616 Identity:174/616 - (28%)
Similarity:264/616 - (42%) Gaps:144/616 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 CVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVP 337
            |:||          ::|..:      |...:|.|.|.||:....:||..:||||||||..|    
Zfish    28 CLPL----------TEGFPK------CTVLQFVCANSRCVSLSSRCDAVNDCGDGSDEISC---- 72

  Fly   338 CDSVAEHTCTNG--------ACIAKRWVCDGDPDCSDGSDER--SCANVTKTTTPCLSHEYQCKD 392
                  ..||||        :|::...||||.|||:||:||:  :|.:.:: ..||         
Zfish    73 ------WNCTNGSFHCVASESCVSSSSVCDGRPDCADGADEQLDTCTSFSQ-AQPC--------- 121

  Fly   393 RITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQCGDRSCIPGHLTCNGDKDCADGSDER 457
                                                                             
Zfish   122 ----------------------------------------------------------------- 121

  Fly   458 DCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCM 522
                            |.|||.|..|||||.|..||...||.||.||.  .|..||||..||||.
Zfish   122 ----------------ARSEFTCTNGQCVPNSWRCDHSSDCKDGSDEE--DCDHNECAVNNGGCS 168

  Fly   523 HQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNH 587
            |.||||..|..|:|.:|.:|..| .:|:.:::|.....|.||||:..|...|:|:.||.. ....
Zfish   169 HTCIDLPFGFRCDCPKGMRLVQD-THCEVVDQCLDADVCDQICVHSNGSVVCDCQDGYQL-TAGT 231

  Fly   588 TRCKASEGHASLLLARRHDIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKA 652
            .:|:|:.|.|.:.::.:..|:.:.|...|..:|.:...:...:..:.....::||......||:.
Zfish   232 GQCRATGGLAHVAVSTQEGIKMMDLSGSEERNITDKRLSPGPVSALNAHNTLYWSSPENDIIYRM 296

  Fly   653 PIDEGNEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSI 717
            .:|.|:.:..|..|:|....|||||||:..:|:..|....:.:.:.:.:..::|: ..|..|.::
Zfish   297 SLDSGDHRPAVWLKASKGIVGLAVDWIHESLYWISTSTRALHMASLKNTKQRLLI-SGLSKPTAV 360

  Fly   718 ALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISS 782
            |:.|:.|:::|::.|.|.||||.|:||..|..::...|:.|..|:||:.:..:||.|..|..||.
Zfish   361 AVQPLLGYVFWAEGGESARIERVGLDGESRFALVVSFVRNPVAISLDIPRGLLYWADSGLRSISR 425

  Fly   783 ANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQH-- 845
            ..:||..|..|:.|..||..||.:..||..|||:|....::..|:|..|      |.:.:.|.  
Zfish   426 VLFDGQYRKTVVESNGYLDQPFGLAIFESRVYWSDQLTNSICSADKHNG------TMLRVPQRLG 484

  Fly   846 ---PMVVHVYHPYRQPDGVNHC-QSVNGHCS 872
               |..:.:.||..||.....| .|:.|..|
Zfish   485 SASPAGLVILHPLLQPAAALSCLYSLTGAVS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566
LDLa 178..210 CDD:197566
LDLa 219..254 CDD:238060
LDLa 259..295 CDD:238060 4/21 (19%)
LDLa 343..373 CDD:238060 16/39 (41%)
LDLa 383..415 CDD:197566 1/31 (3%)
Ldl_recept_a 423..459 CDD:278486 0/35 (0%)
LDLa 476..504 CDD:197566 16/27 (59%)
FXa_inhibition 514..549 CDD:291342 17/34 (50%)
EGF_CA 551..581 CDD:214542 10/29 (34%)
LY 662..702 CDD:214531 12/39 (31%)
LY 704..747 CDD:214531 16/42 (38%)
LY 749..790 CDD:214531 13/40 (33%)
FXa_inhibition 864..905 CDD:291342 4/10 (40%)
si:dkey-258f14.3XP_021334056.1 LDLa 38..72 CDD:238060 16/33 (48%)
PRKCSH-like <45..>112 CDD:193472 31/76 (41%)
LDLa 121..155 CDD:238060 20/125 (16%)
FXa_inhibition 160..193 CDD:317114 17/33 (52%)
Ldl_recept_b 367..407 CDD:278487 15/39 (38%)
LY 393..433 CDD:214531 13/39 (33%)
LY 434..476 CDD:214531 15/47 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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