DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and lrp1ba

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:XP_021325253.1 Gene:lrp1ba / 565136 ZFINID:ZDB-GENE-050208-608 Length:4654 Species:Danio rerio


Alignment Length:875 Identity:314/875 - (35%)
Similarity:442/875 - (50%) Gaps:127/875 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 TPLGI------GQ----------SLEAKCD-EKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKE 171
            ||||:      |:          |..:.|: ..:|||.:|:||..:..|||.|.|||.|||:::.
Zfish  2486 TPLGVVNCSCRGERILLDDNRCVSPNSSCNIHSEFQCGNGECIDYQLTCDGIAHCKDRSDEKMQY 2550

  Fly   172 C---------------------KFI----------------EATCSSDQFRCGNGNCIPNKWRCD 199
            |                     :|.                .::|.|.:.||.:|:|||....|:
Zfish  2551 CENRNCRHGFKSCYNQRCVSNQRFCNGVNDCGDNSDEVYCNNSSCLSSEHRCADGSCIPTSSWCN 2615

  Fly   200 QESDCADGSDEA---NELCMN------ACPNNE--FKCQTVDQCIPRSWLCDGSNDCRDKSDEAH 253
            |..||||.|||.   |..||.      ...|.|  ..|.:...|:..||:|||:|||.|.:||.|
Zfish  2616 QIIDCADASDEKSCNNTDCMGYYRLGARASNTERFLSCNSTSLCVHPSWICDGANDCGDYADETH 2680

  Fly   254 CRA---RTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKR 315
            |.|   .||....:||.|  |.|:...|:||..|||.||:||..|:.:|..::|.|...:||.|:
Zfish  2681 CHASAVHTCEDGHFACPS--GNCISSVWLCDGQKDCEDGADEFQCDSSCLWNQFACSKNKCISKQ 2743

  Fly   316 WKCDHDDDCGDGSDEKE--CPVVPCDSVAEHTCTNG-ACIAKRWVCDGDPDCSDGSDERSCANVT 377
            |.||.:||||||.||.:  |....| |....:|... ||:::.|:|||:.||.|||||.:.|...
Zfish  2744 WLCDGEDDCGDGLDESQEICGSASC-SPGLFSCPGSYACVSRNWLCDGERDCPDGSDELALAGCA 2807

  Fly   378 KTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQCGDRSC-IPGH 441
            ...| |....:||::: .|:...::||.|.||.|..|| :..|:...|:.::|:|.|..| :...
Zfish  2808 PNNT-CTDSTFQCRNQ-NCIPRRFVCDHDDDCGDASDE-SLECEYRLCKEEEFRCADGRCLLRAQ 2869

  Fly   442 LTCNGDKDCADGSDE----RDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPDGE 502
            ..|:|..||.|.|||    ..|..:.||      ||.| .|.|..|:||||..||::..||.|..
Zfish  2870 WECDGFPDCQDQSDELPLNPKCSAAESL------CNGT-VFMCANGRCVPLGSVCNQHDDCGDRS 2927

  Fly   503 DEPAGKCGINECAS-KNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGKCSQICV 566
            ||  ..|.:|||.: |..||...|.||.||:.|.|..|::|..|.|.|.|::||.....|||.||
Zfish  2928 DE--RNCHVNECLNRKVSGCTQDCQDLPVGYKCSCWPGFRLKHDGRMCIDVDECSEQFPCSQQCV 2990

  Fly   567 NEIGGFKCECEAGYMRDPKNHTRCKA-SEGHASLLLARRHDIRKIALDHMEMTSIVNSTKAATAL 630
            |..|.|.|.|..||.|...|...|:: |.....|:||..|:||||:||....|.:........:|
Zfish  2991 NTYGSFHCLCADGYQRPASNTHSCRSLSAEQPFLILADHHEIRKISLDGSNYTLLKQGLSNVISL 3055

  Fly   631 DFVFRTGMIFWSDVTTQS---IYKAPIDEGNEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCT 692
            ||..|..:|:|.|.:..|   |.:..::..:.|  |:.::||.| .||||||..::|:.|..:.|
Zfish  3056 DFDSRKELIYWIDTSRPSGRRINRMRLNGSDLK--VVHRTSVPS-ALAVDWIGKNLYWCDGERKT 3117

  Fly   693 IELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKW 757
            :|:....|....||::..|..|.::|||.:.|:::|.|....|:|.|.|||||....||..:::.
Zfish  3118 LEVAKANGLYPTVLLRTGLRNPTALALDTLTGYVFWIDCCEQPQIGRIGMDGSKPRVIIDTEIRS 3182

  Fly   758 PNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPF-------SITTFEDNVYW 815
            |:.:|:|.|.|||||.|.  |.|..||.||::|.:|         |.       .:|.|||.:||
Zfish  3183 PSALTIDHVNKRIYWADE--NHILFANIDGTKRHKV---------PIQDIGGVTGLTLFEDFIYW 3236

  Fly   816 TDWDKQAVFKANKFT-GEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNH-CQSVNGHCSHLCLPA 878
            :|...:.:.:::|.: |:..|.:::...::.   :.||||.||||...| ||..||.||||||.:
Zfish  3237 SDQKSKTLSRSHKTSGGKQTELLSSWQTIRD---IQVYHPLRQPDVPKHQCQVTNGGCSHLCLLS 3298

  Fly   879 PRINERSPRISCACPTGLKLMVDGLMCVED 908
            |     .....|||||...|..|...|:.:
Zfish  3299 P-----GGGYKCACPTHFYLANDNKTCLSN 3323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 15/32 (47%)
LDLa 178..210 CDD:197566 15/31 (48%)
LDLa 219..254 CDD:238060 15/36 (42%)
LDLa 259..295 CDD:238060 16/35 (46%)
LDLa 343..373 CDD:238060 14/30 (47%)
LDLa 383..415 CDD:197566 10/31 (32%)
Ldl_recept_a 423..459 CDD:395011 13/40 (33%)
LDLa 476..504 CDD:197566 12/27 (44%)
FXa_inhibition 514..549 CDD:464251 15/35 (43%)
EGF_CA 551..581 CDD:214542 14/29 (48%)
LY 662..702 CDD:214531 15/39 (38%)
LY 704..747 CDD:214531 18/42 (43%)
LY 749..790 CDD:214531 18/40 (45%)
Ldl_recept_b 769..815 CDD:459654 18/52 (35%)
FXa_inhibition 864..905 CDD:464251 18/40 (45%)
lrp1baXP_021325253.1 LDLa 30..62 CDD:197566
LDLa 74..107 CDD:197566
FXa_inhibition 161..191 CDD:464251
LY 276..309 CDD:214531
LY 317..359 CDD:214531
LY 362..402 CDD:214531
FXa_inhibition 487..519 CDD:464251
LY 553..593 CDD:214531
LY 594..633 CDD:214531
LY 640..689 CDD:214531
LY 690..732 CDD:214531
FXa_inhibition 801..838 CDD:464251
LDLa 891..924 CDD:238060
LDLa 974..1007 CDD:238060
LDLa 1011..1042 CDD:197566
LDLa 1057..1092 CDD:238060
LDLa 1104..1135 CDD:238060
LDLa 1140..1173 CDD:197566
FXa_inhibition 1180..1216 CDD:464251
LY 1284..1322 CDD:214531
Vgb 1306..>1498 CDD:443399
LY 1331..1370 CDD:214531
LY 1375..1418 CDD:214531
Ldl_recept_b 1622..1662 CDD:459654
LY 1645..1687 CDD:214531
LY 1689..1728 CDD:214531
LY <1739..1770 CDD:214531
FXa_inhibition 1842..1878 CDD:464251
NHL 1923..>2095 CDD:302697
NHL repeat 1923..1956 CDD:271320
NHL repeat 1961..1996 CDD:271320
NHL repeat 2002..2040 CDD:271320
NHL repeat 2043..2084 CDD:271320
FXa_inhibition 2151..2186 CDD:464251
LY 2265..2305 CDD:214531
Ldl_recept_b 2334..2376 CDD:459654
LY 2359..2401 CDD:214531
FXa_inhibition 2472..2506 CDD:464251 5/19 (26%)
LDLa 2518..2547 CDD:238060 15/28 (54%)
LDLa 2556..2590 CDD:238060 1/33 (3%)
LDLa 2595..2629 CDD:238060 17/33 (52%)
LDLa <2652..2681 CDD:412164 13/28 (46%)
LDLa 2689..2723 CDD:238060 16/35 (46%)
LDLa 2727..2758 CDD:238060 15/30 (50%)
LDLa 2768..2801 CDD:238060 15/33 (45%)
LDLa 2811..2843 CDD:197566 11/33 (33%)
LDLa 2852..2884 CDD:197566 11/31 (35%)
LDLa 2898..2932 CDD:238060 17/36 (47%)
cEGF 2957..2978 CDD:463661 8/20 (40%)
EGF_CA 2975..3005 CDD:214542 14/29 (48%)
LY 3042..3086 CDD:214531 10/43 (23%)
LY 3088..3125 CDD:214531 15/39 (38%)
Ldl_recept_b 3149..3190 CDD:459654 15/40 (38%)
LY 3173..3213 CDD:214531 18/41 (44%)
FXa_inhibition 3284..3320 CDD:464251 18/40 (45%)
LDLa 3324..3355 CDD:197566 314/875 (36%)
LDLa 3364..3398 CDD:238060
LDLa 3403..3438 CDD:238060
LDLa 3443..3478 CDD:238060
LDLa 3483..3517 CDD:238060
LDLa 3522..3556 CDD:238060
LDLa 3560..3594 CDD:238060
LDLa 3608..3642 CDD:238060
LDLa 3646..3681 CDD:238060
LDLa 3688..3720 CDD:238060
LDLa 3729..3765 CDD:238060
LDLa 3775..3809 CDD:238060
Ldl_recept_b 4051..4092 CDD:459654
LY 4075..4116 CDD:214531
Blue background indicates that the domain is not in the aligned region.

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