DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and trol

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster


Alignment Length:1033 Identity:259/1033 - (25%)
Similarity:364/1033 - (35%) Gaps:301/1033 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NLGEKRR-----AEQLFRCACANFNLLLLTLMLGFGKC--------C------TATPTPLNTPST 78
            |:.||..     |...|||..:|..:.|.....||..|        |      |.|..||   :.
  Fly   693 NVYEKANSQNPCASNQFRCTTSNVCIPLHLRCDGFYHCNDMSDEKSCEQYQRHTTTRRPL---TL 754

  Fly    79 NTPTSAVSPHNPQTLDESGSLSKVIDGKAFINMGFKFLNVSGKIGTPL---GIGQSLEAKCDEK- 139
            .||||.::...|..|:...:.:.....:  .....|...::.....|:   |:..|....|.|. 
  Fly   755 ATPTSRITTQGPGLLERRNTTTATEASR--WPWATKTTTIATTTSNPITTVGVANSPPQTCLENI 817

  Fly   140 QFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSD---------------------- 182
            :|.||:.|||.|..||||..||..:.||....||     ||.|                      
  Fly   818 EFACHNRDCISIESVCDGIPDCGRNEDEDDALCK-----CSGDKYKCQRGGGCIPKSQVCDGKPQ 877

  Fly   183 ----------------------------QFRCGNGNCIPNKWRCDQESDCADGSDEANELC---- 215
                                        |::||:|:||....||:...||||.|||.|  |    
  Fly   878 CHDRSDESACHLHGRLNKTRLGVKCLESQYQCGDGSCISGYKRCNGIHDCADASDEYN--CIYDY 940

  Fly   216 ------------MNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRART--CSPDEYAC 266
                        :|.|...||:|. ..||:|....|||..||.|.|||..|::.|  |...|:.|
  Fly   941 EDTYDTDPNNNPLNECDILEFECD-YSQCLPLEKKCDGYADCEDMSDELECQSYTDHCLESEFEC 1004

  Fly   267 KSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEK 331
            .|   .|:|...:|:...:|.|||||.||. .||.|.:.|..|.|:....:|:...||.|||||:
  Fly  1005 DS---YCLPRDQLCNGIPNCQDGSDERNCT-FCREDAYLCNTGECVADNQRCNGIADCADGSDER 1065

  Fly   332 ECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDERSC-----------ANVTK------- 378
            .|..:.|.  ......||.|:::|..|||..||.||.||..|           .||.:       
  Fly  1066 HCARIYCP--PNKLACNGTCVSRRIKCDGIRDCLDGYDEMYCPETNNHYPTQNVNVIRPKLGPNP 1128

  Fly   379 TTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANC--------KNVTCRADQFQCGDR 435
            ....|..||:||.: :.|:..|..|:..:||.||.||..:.|        |...|..:||.| |.
  Fly  1129 IPKSCRPHEWQCAN-LECIDSSLQCNEIKDCSDGSDEELSVCFGTATTRLKPSDCSPEQFYC-DE 1191

  Fly   436 SCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPD 500
            ||....:.|||..||:|||||..|.|.         |   .:..|..|:|...|:.||:.:.|.|
  Fly  1192 SCYNRSVRCNGHVDCSDGSDEVGCSLP---------C---PQHQCPSGRCYTESERCDRHRHCED 1244

  Fly   501 GEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVP------- 558
            |.|| |..|..|:....||.|:...........|..|.      |:.||....|| :|       
  Fly  1245 GSDE-ANCCYANQFRCNNGDCVSGSAPCNGYSECSDHS------DELNCGGTQEC-LPNQFRCNS 1301

  Fly   559 GKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVNS 623
            |:|....|...|...|:       |..:...|.|..          :|.|.   :.:.:.:..:|
  Fly  1302 GQCVSSSVRCNGRTDCQ-------DSSDEQNCAADS----------NDRRP---NQLNLKTYPDS 1346

  Fly   624 TKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVV---------LTKSSVTSDG-LAVDW 678
            .....:.:.:||..                 |||..:..|         |.......:| |.:..
  Fly  1347 QIIKESREVIFRCR-----------------DEGPARAKVKWSRPGGRPLPPGFTDRNGRLEIPN 1394

  Fly   679 IYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMD 743
            |  .|....|:.|  |...:...:....|..:|::.|            ::|.|:.|        
  Fly  1395 I--RVEDAGTYVC--EAVGYASYIPGQQVTVNLNVER------------YNDVGSRP-------- 1435

  Fly   744 GSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGS-------QRSQVLYSGEYLR 801
               .:....|.....||..:|  |..|  .||..: .|.|:.:.|       |.:|.:.|.    
  Fly  1436 ---ESACTEYQATCMNGECID--KSSI--CDGNPD-CSDASDEQSCSLGLKCQPNQFMCSN---- 1488

  Fly   802 HPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNHCQS 866
                 :...|..:..|.:......::: |..|.||..|                  |...|..|.
  Fly  1489 -----SKCVDRTWRCDGENDCGDNSDE-TSCDPEPSGA------------------PCRYNEFQC 1529

  Fly   867 VNGHC---SHLCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLPPVTRPPRA 921
            .:|||   |..|...|...:.:..:.|..|.                   |:..||::
  Fly  1530 RSGHCIPKSFQCDNVPDCTDGTDEVGCMAPL-------------------PIRPPPQS 1568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 15/32 (47%)
LDLa 178..210 CDD:197566 16/81 (20%)
LDLa 219..254 CDD:238060 16/34 (47%)
LDLa 259..295 CDD:238060 13/35 (37%)
LDLa 343..373 CDD:238060 13/29 (45%)
LDLa 383..415 CDD:197566 12/31 (39%)
Ldl_recept_a 423..459 CDD:395011 17/35 (49%)
LDLa 476..504 CDD:197566 9/27 (33%)
FXa_inhibition 514..549 CDD:464251 6/34 (18%)
EGF_CA 551..581 CDD:214542 8/36 (22%)
LY 662..702 CDD:214531 9/49 (18%)
LY 704..747 CDD:214531 6/42 (14%)
LY 749..790 CDD:214531 11/47 (23%)
Ldl_recept_b 769..815 CDD:459654 10/52 (19%)
FXa_inhibition 864..905 CDD:464251 9/43 (21%)
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060
LDLa 704..739 CDD:238060 9/34 (26%)
LDLa 813..847 CDD:238060 17/33 (52%)
LDLa 852..887 CDD:238060 3/34 (9%)
LDLa 902..936 CDD:238060 16/35 (46%)
LDLa 956..990 CDD:238060 16/34 (47%)
LDLa 997..1030 CDD:238060 13/35 (37%)
LDLa 1033..1067 CDD:238060 14/33 (42%)
LDLa 1072..1105 CDD:238060 14/34 (41%)
LDLa 1133..1165 CDD:238060 13/32 (41%)
LDLa 1182..1215 CDD:238060 17/33 (52%)
LDLa 1221..1251 CDD:238060 12/30 (40%)
LDLa 1252..1286 CDD:238060 8/39 (21%)
LDLa 1292..1326 CDD:238060 8/41 (20%)
Ig 1344..1405 CDD:472250 13/79 (16%)
Ig strand B 1355..1359 CDD:409353 1/3 (33%)
Ig strand C 1369..1372 CDD:409353 1/2 (50%)
Ig strand E 1388..1392 CDD:409353 2/3 (67%)
LDLa 1439..1473 CDD:238060 10/38 (26%)
LDLa 1479..1513 CDD:238060 6/43 (14%)
LDLa 1522..1556 CDD:238060 8/33 (24%)
Ig_Perlecan_like 1574..1649 CDD:143220
Ig strand B 1577..1583 CDD:143220
Ig strand C 1590..1595 CDD:143220
Ig strand E 1613..1617 CDD:143220
Ig strand F 1626..1632 CDD:143220
Ig strand G 1641..1647 CDD:143220
Laminin_B 1748..1878 CDD:459652
EGF_Lam 1935..1989 CDD:238012
Laminin_B 2113..2249 CDD:459652
EGF_Lam <2250..2276 CDD:238012
EGF_Lam 2284..2333 CDD:238012
Laminin_EGF <2369..2399 CDD:395007
Laminin_B 2465..2599 CDD:459652
Ig_3 2688..2756 CDD:464046
Ig_3 2791..2861 CDD:464046
Ig_3 2890..2958 CDD:464046
Ig 2987..3071 CDD:472250
Ig strand B 3004..3008 CDD:409353
Ig strand C 3017..3021 CDD:409353
Ig strand E 3036..3040 CDD:409353
Ig strand F 3050..3055 CDD:409353
Ig strand G 3063..3066 CDD:409353
I-set 3089..3162 CDD:400151
Ig strand B 3094..3098 CDD:409353
Ig strand C 3107..3111 CDD:409353
Ig strand E 3128..3132 CDD:409353
Ig strand F 3142..3147 CDD:409353
Ig strand G 3155..3158 CDD:409353
Ig 3165..3253 CDD:472250
Ig strand B 3185..3189 CDD:409353
Ig strand C 3198..3202 CDD:409353
Ig strand E 3219..3223 CDD:409353
Ig strand F 3233..3238 CDD:409353
Ig strand G 3246..3249 CDD:409353
Ig 3298..3355 CDD:472250
Ig strand B 3301..3305 CDD:409353
Ig strand C 3313..3316 CDD:409353
Ig strand E 3333..3336 CDD:409353
IG_like 3381..3457 CDD:214653
Ig strand B 3390..3394 CDD:409353
Ig strand C 3403..3407 CDD:409353
Ig strand F 3437..3442 CDD:409353
IG_like 3475..>3536 CDD:214653
Ig strand B 3480..3484 CDD:409353
Ig strand C 3491..3503 CDD:409353
Ig strand E 3519..3523 CDD:409353
Ig 3613..3675 CDD:472250
Ig strand B 3625..3629 CDD:409353
Ig strand C 3637..3642 CDD:409353
Ig strand E 3658..3662 CDD:409353
IG_like 3706..3772 CDD:214653
Ig strand B 3714..3718 CDD:409353
Ig strand C 3727..3731 CDD:409353
Ig strand E 3746..3750 CDD:409353
Ig strand F 3760..3765 CDD:409353
Ig strand G 3774..3777 CDD:409353
LamG 3794..3939 CDD:238058
EGF 3962..3994 CDD:394967
LamG 4042..4195 CDD:238058
EGF_CA 4254..4286 CDD:238011
LamG 4295..4448 CDD:238058
Blue background indicates that the domain is not in the aligned region.

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