Sequence 1: | NP_001097934.2 | Gene: | LpR1 / 2768687 | FlyBaseID: | FBgn0066101 | Length: | 1076 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005155618.1 | Gene: | vldlr / 393897 | ZFINID: | ZDB-GENE-040426-803 | Length: | 877 | Species: | Danio rerio |
Alignment Length: | 925 | Identity: | 386/925 - (41%) |
---|---|---|---|
Similarity: | 517/925 - (55%) | Gaps: | 110/925 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 177 ATCSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCM-NACPNNEFKCQTVDQCIPRSWLCD 240
Fly 241 GSNDCRDKSDEA--HCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNC-NQTCRAD 302
Fly 303 EFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDG 367
Fly 368 SDE--RSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQF 430
Fly 431 QCGDRSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKR 495
Fly 496 KDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGK 560
Fly 561 CSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVNSTK 625
Fly 626 AATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVVLTKSSVTSD-----GLAVDWIYNHVYF 685
Fly 686 TDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTI 750
Fly 751 ISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYW 815
Fly 816 TDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNHC--QSVNGHCSHLCLPA 878
Fly 879 PRINERSPRISCACPTGLKLMVDGLMCVEDPLYLPPVTRPPRARKTKPRPKSPRRRLPTGVQVGH 943
Fly 944 ADIRIEINDDLQLSTRLPLLP----TTFVADQRPVKNHTQIEKTTTPSEQPDSGFIALVVIASLS 1004
Fly 1005 GFA---VLLSVLLLI-----GY---RYCSKRRINSMNFENPIYRKTTTTEDHFSLRKNLPARIYD 1058
Fly 1059 HTSVMDEEYSPVIGI 1073 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LpR1 | NP_001097934.2 | LDLa | 135..167 | CDD:197566 | |
LDLa | 178..210 | CDD:197566 | 18/31 (58%) | ||
LDLa | 219..254 | CDD:238060 | 17/36 (47%) | ||
LDLa | 259..295 | CDD:238060 | 16/35 (46%) | ||
LDLa | 343..373 | CDD:238060 | 15/31 (48%) | ||
LDLa | 383..415 | CDD:197566 | 15/31 (48%) | ||
Ldl_recept_a | 423..459 | CDD:278486 | 20/35 (57%) | ||
LDLa | 476..504 | CDD:197566 | 13/27 (48%) | ||
FXa_inhibition | 514..549 | CDD:291342 | 15/34 (44%) | ||
EGF_CA | 551..581 | CDD:214542 | 19/29 (66%) | ||
LY | 662..702 | CDD:214531 | 15/44 (34%) | ||
LY | 704..747 | CDD:214531 | 22/42 (52%) | ||
LY | 749..790 | CDD:214531 | 20/40 (50%) | ||
FXa_inhibition | 864..905 | CDD:291342 | 22/42 (52%) | ||
vldlr | XP_005155618.1 | LDLa | 29..63 | CDD:238060 | 20/35 (57%) |
LDLa | 67..99 | CDD:197566 | 15/32 (47%) | ||
Ldl_recept_a | 107..145 | CDD:278486 | 18/37 (49%) | ||
Ldl_recept_a | 149..184 | CDD:278486 | 19/34 (56%) | ||
Ldl_recept_a | 234..269 | CDD:278486 | 17/37 (46%) | ||
Ldl_recept_a | 272..308 | CDD:278486 | 20/35 (57%) | ||
LDLa | 316..346 | CDD:238060 | 13/29 (45%) | ||
FXa_inhibition | 356..390 | CDD:291342 | 15/34 (44%) | ||
EGF_CA | 392..426 | CDD:214542 | 21/33 (64%) | ||
NHL | 479..>570 | CDD:302697 | 35/95 (37%) | ||
LY | 504..541 | CDD:214531 | 14/36 (39%) | ||
NHL repeat | 511..551 | CDD:271320 | 16/39 (41%) | ||
Ldl_recept_b | 564..604 | CDD:278487 | 20/39 (51%) | ||
LY | 588..630 | CDD:214531 | 20/41 (49%) | ||
Ldl_recept_b | 651..690 | CDD:278487 | 16/40 (40%) | ||
FXa_inhibition | 707..745 | CDD:291342 | 21/37 (57%) | ||
Mucin | <723..817 | CDD:250634 | 38/143 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 57 | 1.000 | Domainoid score | I10830 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H443 | |
Inparanoid | 1 | 1.050 | 720 | 1.000 | Inparanoid score | I618 |
OMA | 1 | 1.010 | - | - | QHG49125 | |
OrthoDB | 1 | 1.010 | - | - | D179614at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm6597 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103130 | |
Panther | 1 | 1.100 | - | - | O | PTHR24270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R7933 |
SonicParanoid | 1 | 1.000 | - | - | X1052 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.010 |