DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and CG6553

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_610911.1 Gene:CG6553 / 36537 FlyBaseID:FBgn0033880 Length:319 Species:Drosophila melanogaster


Alignment Length:209 Identity:39/209 - (18%)
Similarity:73/209 - (34%) Gaps:52/209 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 GRKLVDYDSQRHS---------------------------------FQSLQANAAKRK----DDL 166
            ||.|.||:.|:.|                                 .::::|....::    |..
  Fly    53 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 117

  Fly   167 KVTRGREQLEEAK--STYEV-LNSELHDELPALYDSRILFLVTNLQTLFACEQQFHSETSKVYAE 228
            ::....:|||:.:  |.|.: ..|.||..| .|.....:|:.|........|.:.......|.|:
  Fly   118 RLIFAGKQLEDGRTLSDYNIQKESTLHLV
L-RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 181

  Fly   229 LEAIVDK--LATESQRGSYTLKKINANSNPSSPQQSPVKANLSIVNNVTNGS----ANANGRAAT 287
            ::   ||  :..:.||..:..|::. :....|......::.|.:|..:..|.    ....|:..|
  Fly   182 IQ---DKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT 242

  Fly   288 TDLPPG-VLYRVKA 300
            .::.|. .:..|||
  Fly   243 LEVEPSDTIENVKA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 9/64 (14%)
LDLa 178..210 CDD:197566 9/34 (26%)
LDLa 219..254 CDD:238060 7/36 (19%)
LDLa 259..295 CDD:238060 6/40 (15%)
LDLa 343..373 CDD:238060
LDLa 383..415 CDD:197566
Ldl_recept_a 423..459 CDD:395011
LDLa 476..504 CDD:197566
FXa_inhibition 514..549 CDD:464251
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
Ldl_recept_b 769..815 CDD:459654
FXa_inhibition 864..905 CDD:464251
CG6553NP_610911.1 LDLa 34..60 CDD:197566 4/6 (67%)
LDLa 70..101 CDD:197566 0/30 (0%)
LDLa 115..146 CDD:197566 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.

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