DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and LRP1

DIOPT Version :9

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001260800.2 Gene:LRP1 / 35799 FlyBaseID:FBgn0053087 Length:4752 Species:Drosophila melanogaster


Alignment Length:866 Identity:309/866 - (35%)
Similarity:429/866 - (49%) Gaps:129/866 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNKW 196
            :...|...|:.||||:|||:...||....|.|.|||....|.|.:  |....|.|.|..|||.:.
  Fly  2626 VNTSCGLSQYNCHSGECIPLELTCDNVTHCADGSDEFRSYCIFRQ--CPETHFMCQNHRCIPKEH 2688

  Fly   197 RCDQESDCADGSDEANELC--------MNACPNNE------FKCQTVDQCIPRSWLCDGSNDCRD 247
            :||.|..|.|||||...||        |:...||.      |:|.: .:||||.:|||...||||
  Fly  2689 KCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGS-GECIPRKFLCDSLKDCRD 2752

  Fly   248 KSDE---------------AHCRART-------------------------------CSPDEYAC 266
            .|||               .||...|                               |.|.::.|
  Fly  2753 FSDEKMCAPIPCEKNDMTFVHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRC 2817

  Fly   267 KSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDE- 330
            .|  |.|:..:|.||..|||.|||||.||...||.::|.| :..||...|:||...||.||||| 
  Fly  2818 AS--GNCIAGSWHCDGEKDCPDGSDEINCRTECRHNQFAC-DKTCIPASWQCDGKSDCEDGSDEG 2879

  Fly   331 KECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDG-SDERS------CANVTKTTTPCLSHEY 388
            .:||..||........::|.||.::|||||:.||..| .||.|      |..|.. ...|....:
  Fly  2880 PQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPSGLGDEGSEDEGPQCGGVAH-IPDCPPPAH 2943

  Fly   389 QCKDRITCLHHSWLCDGDRDCPDGDDEHTA--------NCKNVTCRADQFQCGDRSCIPGHLTCN 445
            .|...: |:...::||||.|||.||||:..        :|...:.   ..||.|..||..:.||:
  Fly  2944 LCTSGL-CIDSHYVCDGDEDCPGGDDEYEGCVPAFQPHSCPGGSL---MHQCQDGLCIFKNQTCD 3004

  Fly   446 GDKDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPDGEDEPAGKCG 510
            |..||.|||||     :.||..:..|||.|.:|.|..|.|:....:||:|.||.|..||..  |.
  Fly  3005 GKPDCGDGSDE-----TSSLCAHTRGCNGTDDFRCKNGACIHADLLCDRRNDCADFSDEEL--CN 3062

  Fly   511 INECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRN-CQDINECEVPGKCSQICVNEIGGFKC 574
            :|||...: .|.|:|.|..||:.|.|..|||:.|...: |.||:||:....|||.|:|..|.:||
  Fly  3063 VNECLIPD-ICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKC 3126

  Fly   575 ECEAGYMRDPKNHTRCKA-SEGHASLLLARRHDIRKIALDHMEMTS----IVNSTKAATALDFVF 634
            .|..||..  .:|..||| |.....|:.:.|:.||::     :||.    ::|....|.|||:.:
  Fly  3127 LCAKGYAL--VDHHTCKATSNVSMELIFSNRYYIRQV-----DMTGNGSILINELSNAVALDYDW 3184

  Fly   635 RTGMIFWSDVT-TQSIYKAPIDEGNEKTVVLTKSSVTS-DGLAVDWIYNHVYFTDTHKCTIELTN 697
            .:..::||||| |....|....:.| ||..|.::.:.: |||||||:..::|:.|....|||::.
  Fly  3185 DSQCLYWSDVTSTVGTIKRYCPKEN-KTQTLHQAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQ 3248

  Fly   698 FEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGIT 762
            .:|...|||:.:.|..||.|||.|.:..::|||||.||.|.:||||||:...||...:.|||.:|
  Fly  3249 LDGKYRKVLINEYLREPRGIALHPYQQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALT 3313

  Fly   763 LDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEY-----LRHPFSITTFEDNVYWTDWDKQA 822
            :....::::|.|.:.:.||.::.||: .:::|.:...     |.|.|:|..:|.::||:||:.::
  Fly  3314 ISFETQQLFWGDAREDTISVSDLDGN-HTRLLLARSINPLLNLHHIFAIAVWEGHIYWSDWETKS 3377

  Fly   823 VFKANKFTGEDVEP-VTAMHMLQHPMVVHVYHPYR--QPDGVNHCQSVNGHCSHLCLPAPRINER 884
            :...:.|.|::... :|.:|   .||.:.|:||||  ||...|.|.:.|  ||.||:.:|    .
  Fly  3378 IEYCSIFNGQNCTTLITTIH---RPMDLRVFHPYRQQQPMSGNPCLAAN--CSTLCVLSP----E 3433

  Fly   885 SPRISCACPTGLKLMVDGLMC 905
            .|...|.|||...|..||..|
  Fly  3434 EPYYKCMCPTNFILADDGRTC 3454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 14/31 (45%)
LDLa 178..210 CDD:197566 14/31 (45%)
LDLa 219..254 CDD:238060 18/55 (33%)
LDLa 259..295 CDD:238060 17/35 (49%)
LDLa 343..373 CDD:238060 14/36 (39%)
LDLa 383..415 CDD:197566 12/31 (39%)
Ldl_recept_a 423..459 CDD:278486 15/35 (43%)
LDLa 476..504 CDD:197566 10/27 (37%)
FXa_inhibition 514..549 CDD:291342 13/35 (37%)
EGF_CA 551..581 CDD:214542 14/29 (48%)
LY 662..702 CDD:214531 14/40 (35%)
LY 704..747 CDD:214531 24/42 (57%)
LY 749..790 CDD:214531 12/40 (30%)
FXa_inhibition 864..905 CDD:291342 15/40 (38%)
LRP1NP_001260800.2 LDLa 87..118 CDD:197566
LDLa 126..163 CDD:238060
EGF_CA 246..283 CDD:214542
Ldl_recept_b 449..487 CDD:278487
LY 472..513 CDD:214531
LY 817..852 CDD:214531
LDLa 1057..1092 CDD:197566
LDLa 1104..1134 CDD:238060
FXa_inhibition 1289..1317 CDD:291342
LY 1434..1476 CDD:214531
LY 1477..1521 CDD:214531
LY 1533..1567 CDD:214531
LY 1568..1611 CDD:214531
FXa_inhibition 1639..1676 CDD:291342
LY 1794..1838 CDD:214531
LY 2078..2112 CDD:214531
NHL <2082..>2152 CDD:302697
NHL repeat 2082..2120 CDD:271320
FXa_inhibition 2269..2303 CDD:291342
LY 2430..2471 CDD:214531
LY 2475..2517 CDD:214531
LDLa 2630..2661 CDD:238060 14/30 (47%)
LDLa 2671..2702 CDD:238060 14/30 (47%)
LDLa 2727..2759 CDD:238060 16/32 (50%)
LDLa 2773..2802 CDD:238060 3/28 (11%)
LDLa 2810..2844 CDD:238060 17/35 (49%)
LDLa 2848..2878 CDD:238060 14/30 (47%)
LDLa 2887..2916 CDD:197566 11/28 (39%)
LDLa 2938..2969 CDD:197566 12/31 (39%)
LDLa 2989..3015 CDD:197566 13/25 (52%)
LDLa 3030..3061 CDD:238060 12/32 (38%)
EGF_CA 3062..>3091 CDD:214542 11/29 (38%)
EGF_CA 3103..3141 CDD:214542 16/39 (41%)
LY 3212..3254 CDD:214531 14/41 (34%)
LY 3255..3297 CDD:214531 23/41 (56%)
LY 3299..3340 CDD:214531 12/41 (29%)
LY 3354..3389 CDD:214531 11/34 (32%)
LDLa 3458..3490 CDD:238060
LDLa 3499..3533 CDD:238060
LDLa 3582..3616 CDD:238060
LDLa 3621..3652 CDD:197566
LDLa 3663..3697 CDD:238060
LDLa 3702..3736 CDD:238060
LDLa 3776..3808 CDD:197566
LDLa 3818..3849 CDD:197566
LDLa 3860..3894 CDD:238060
NHL 4029..>4158 CDD:302697
NHL repeat 4034..4074 CDD:271320
NHL repeat 4076..4115 CDD:271320
LY 4108..4150 CDD:214531
NHL repeat 4121..4158 CDD:271320
EGF_CA <4386..4414 CDD:238011
EGF_CA 4415..4450 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461686
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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