DRSC/TRiP Functional Genomics Resources

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Protein Alignment LpR1 and CG6739

DIOPT Version :10

Sequence 1:NP_001097934.2 Gene:LpR1 / 2768687 FlyBaseID:FBgn0066101 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_609130.1 Gene:CG6739 / 34037 FlyBaseID:FBgn0031926 Length:787 Species:Drosophila melanogaster


Alignment Length:642 Identity:144/642 - (22%)
Similarity:215/642 - (33%) Gaps:217/642 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ESRSTSTASETTKTAIKSTTSS--KSP--------------------VTFGNLGEKRRA------ 40
            |:..|||:|.:.:...:.||||  :||                    :.||:.|:....      
  Fly   163 EATLTSTSSSSNEVWDEETTSSTERSPQETTRLEDMDDSDESTELPEIAFGDDGDPEAGGEDGDG 227

  Fly    41 ---EQLFRCACANFN-----------------LLLLTLMLGFGKCCTATPTPLNTPSTNTPT-SA 84
               :.|.......|.                 |.||..:|         ..|..||:.|.|| :.
  Fly   228 DYDDTLLPADSIRFTSGHQNSFGVPIEQDKRMLQLLKELL---------HKPQATPAGNEPTLTR 283

  Fly    85 VSPHNPQTLDESG--------------------SLSKVIDGKAFINMGFKFLNVSGKIGTPLGIG 129
            |||..|..|..||                    ::..:..|....::.|.....:.:....:...
  Fly   284 VSPTLPPPLSASGRPTEAMALTTPSTTNSGCQSTMLPMCQGVLDYDLTFNREGAAPRDAVSMAAY 348

  Fly   130 QSL-EAKCDEK--QFQC----------HSGDCIPIRFVC------------DGDA-----DCKDH 164
            .|| .|.|..:  :|.|          |.|...|.|.:|            :.|.     ||..:
  Fly   349 DSLIRANCSVRAAEFICGALEPECRPLHIGQLPPCRRICKAILEACSIPIYNSDVLGELFDCNLY 413

  Fly   165 SD-EQIKECKFIEAT-----CSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCMNACPNNE 223
            .| .:..:|:  :.|     |..::|:|.:|:|||..|:||:..||..|.|| :|.|: .|..:|
  Fly   414 PDAHESHKCE--DPTRRRDYCYGNEFQCHDGSCIPQNWQCDKIKDCQGGEDE-DEQCL-VCEPDE 474

  Fly   224 FKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSD 288
            |:|::.::|:...:.||.:.||.|.|||..|       |||    |.|...|.            
  Fly   475 FRCRSNEKCLVEKYRCDQNIDCMDGSDEQDC-------DEY----GSGDLAPF------------ 516

  Fly   289 GSDEHNCNQTCRADEFTCG--------NGRCIQKRWKCDHDDDCGDGS----DEKECPVVPCDSV 341
              ||...|...|.  ||..        |.: :........|:|.|..:    .:...|..|.:|.
  Fly   517 --DESELNAFPRV--FTYASFLSPNETNDK-VYTYITATTDEDAGTETKFQIHQVAAPAPPVNSS 576

  Fly   342 AEHTCTNGACIAKRWV---------CDGDPDCSDGSDERSCAN-------VTKTTTPCL------ 384
            ||    .||...|.:|         ...|.:......:|  ||       |:..|||..      
  Fly   577 AE----EGAGGPKGFVNFRDSKEIMMTSDSETKFKYSQR--ANRTSVKFSVSAPTTPAARTSSAI 635

  Fly   385 --SHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQCGDRSCIPGHLTCNGD 447
              |...|.::|.|               ......|......:...........:.||.:      
  Fly   636 PSSALVQQRERTT---------------STTTTSTTTSTTTSSITSTPSITSTTLIPIN------ 679

  Fly   448 KDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPDGEDE 504
               |..|:.....:..||    ||| ...|..|..|:|:.:|::|||:.||||..||
  Fly   680 ---AATSEPNPYEVVTSL----GGC-PPQELRCVSGKCITVSQLCDKQIDCPDAADE 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpR1NP_001097934.2 LDLa 135..167 CDD:197566 12/61 (20%)
LDLa 178..210 CDD:197566 14/36 (39%)
LDLa 219..254 CDD:238060 13/34 (38%)
LDLa 259..295 CDD:238060 8/35 (23%)
LDLa 343..373 CDD:238060 7/38 (18%)
LDLa 383..415 CDD:197566 4/39 (10%)
Ldl_recept_a 423..459 CDD:395011 4/35 (11%)
LDLa 476..504 CDD:197566 12/27 (44%)
FXa_inhibition 514..549 CDD:464251
EGF_CA 551..581 CDD:214542
LY 662..702 CDD:214531
LY 704..747 CDD:214531
LY 749..790 CDD:214531
Ldl_recept_b 769..815 CDD:459654
FXa_inhibition 864..905 CDD:464251
CG6739NP_609130.1 CRD_FZ 314..427 CDD:143549 18/114 (16%)
LDLa 432..464 CDD:238060 15/32 (47%)
LDLa 470..505 CDD:238060 13/34 (38%)
LDLa 697..731 CDD:238060 15/33 (45%)
Blue background indicates that the domain is not in the aligned region.

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